1dup
From Proteopedia
(New page: 200px<br /><applet load="1dup" size="450" color="white" frame="true" align="right" spinBox="true" caption="1dup, resolution 1.9Å" /> '''DEOXYURIDINE 5'-TRIPH...) |
|||
| Line 1: | Line 1: | ||
| - | [[Image:1dup.gif|left|200px]]<br /><applet load="1dup" size=" | + | [[Image:1dup.gif|left|200px]]<br /><applet load="1dup" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1dup, resolution 1.9Å" /> | caption="1dup, resolution 1.9Å" /> | ||
'''DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE (D-UTPASE)'''<br /> | '''DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE (D-UTPASE)'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The enzyme dUTPase catalyses the hydrolysis of dUTP and maintains a low | + | The enzyme dUTPase catalyses the hydrolysis of dUTP and maintains a low intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. dUTPase from Escherichia coli is strictly specific for its dUTP substrate, the active site discriminating between nucleotides with respect to the sugar moiety as well as the pyrimidine base. Here we report the three-dimensional structure of E. coli dUTPase determined by X-ray crystallography at a resolution of 1.9 A. The enzyme is a symmetrical trimer, and of the 152 amino acid residues in the subunit, the first 136 are visible in the crystal structure. The tertiary structure resembles a jelly-roll fold and does not show the 'classical' nucleotide-binding domain. In the quaternary structure there is a complex interaction between the subunits that may be important in catalysis. This possibility is supported by the location of conserved elements in the sequence. |
==About this Structure== | ==About this Structure== | ||
| - | 1DUP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] Full crystallographic information is available from [http:// | + | 1DUP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Active as [http://en.wikipedia.org/wiki/dUTP_diphosphatase dUTP diphosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.23 3.6.1.23] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DUP OCA]. |
==Reference== | ==Reference== | ||
| Line 17: | Line 17: | ||
[[Category: Dauter, Z.]] | [[Category: Dauter, Z.]] | ||
[[Category: Larsson, G.]] | [[Category: Larsson, G.]] | ||
| - | [[Category: Nyman, P | + | [[Category: Nyman, P O.]] |
| - | [[Category: Wilson, K | + | [[Category: Wilson, K S.]] |
[[Category: hydrolase]] | [[Category: hydrolase]] | ||
[[Category: nucleotide metabolism]] | [[Category: nucleotide metabolism]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:20:38 2008'' |
Revision as of 10:20, 21 February 2008
|
DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE (D-UTPASE)
Overview
The enzyme dUTPase catalyses the hydrolysis of dUTP and maintains a low intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. dUTPase from Escherichia coli is strictly specific for its dUTP substrate, the active site discriminating between nucleotides with respect to the sugar moiety as well as the pyrimidine base. Here we report the three-dimensional structure of E. coli dUTPase determined by X-ray crystallography at a resolution of 1.9 A. The enzyme is a symmetrical trimer, and of the 152 amino acid residues in the subunit, the first 136 are visible in the crystal structure. The tertiary structure resembles a jelly-roll fold and does not show the 'classical' nucleotide-binding domain. In the quaternary structure there is a complex interaction between the subunits that may be important in catalysis. This possibility is supported by the location of conserved elements in the sequence.
About this Structure
1DUP is a Single protein structure of sequence from Escherichia coli. Active as dUTP diphosphatase, with EC number 3.6.1.23 Full crystallographic information is available from OCA.
Reference
Crystal structure of a dUTPase., Cedergren-Zeppezauer ES, Larsson G, Nyman PO, Dauter Z, Wilson KS, Nature. 1992 Feb 20;355(6362):740-3. PMID:1311056
Page seeded by OCA on Thu Feb 21 12:20:38 2008
