1g9i
From Proteopedia
(New page: 200px<br /><applet load="1g9i" size="450" color="white" frame="true" align="right" spinBox="true" caption="1g9i, resolution 2.2Å" /> '''CRYSTAL STRUCTURE OF ...) |
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| - | [[Image:1g9i.jpg|left|200px]]<br /><applet load="1g9i" size=" | + | [[Image:1g9i.jpg|left|200px]]<br /><applet load="1g9i" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1g9i, resolution 2.2Å" /> | caption="1g9i, resolution 2.2Å" /> | ||
'''CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE'''<br /> | '''CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The active trypsin inhibiting component, SPC1, was obtained during the | + | The active trypsin inhibiting component, SPC1, was obtained during the synthesis of a 22-residue peptide with three disulfide bridges according to the mimic mung bean Bowman-Birk type inhibitor. The K(i) value of SPC1 is 1.2x10(-7) M. In order to determine the topological structure of SPC1, X-ray diffraction studies were carried out on the complex of SPC1 with bovine beta-trypsin. Only the binding loop of SPC1 resolved at 2.2 A resolution due to conformational flexibility of the other residues [1]. The amino acid sequence was re-determined and electrospray mass spectroscopy was also performed to ensure that no cleaving occurred on SPC1 and the primary sequence of SPC1 is correct. Because the protein is more rigid in nonaqueous medium as has been proved by others [2], we treated the complex of SPC1 with neat cyclohexane and then subjected it to X-ray diffraction analysis, and the result showed that all the 22 residues of SPC1 were located in the electron density map. So the topological structure of SPC1 has been determined, suggesting that crystal treatment with cyclohexane may be used as a method to determine the conformation of the disordered regions in protein crystal structures. |
==About this Structure== | ==About this Structure== | ||
| - | 1G9I is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with CA and SO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] Full crystallographic information is available from [http:// | + | 1G9I is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus] with <scene name='pdbligand=CA:'>CA</scene> and <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G9I OCA]. |
==Reference== | ==Reference== | ||
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[[Category: trypsin-inhibitor complex]] | [[Category: trypsin-inhibitor complex]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:47:39 2008'' |
Revision as of 10:47, 21 February 2008
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CRYSTAL STRUCTURE OF BETA-TRYSIN COMPLEX IN CYCLOHEXANE
Overview
The active trypsin inhibiting component, SPC1, was obtained during the synthesis of a 22-residue peptide with three disulfide bridges according to the mimic mung bean Bowman-Birk type inhibitor. The K(i) value of SPC1 is 1.2x10(-7) M. In order to determine the topological structure of SPC1, X-ray diffraction studies were carried out on the complex of SPC1 with bovine beta-trypsin. Only the binding loop of SPC1 resolved at 2.2 A resolution due to conformational flexibility of the other residues [1]. The amino acid sequence was re-determined and electrospray mass spectroscopy was also performed to ensure that no cleaving occurred on SPC1 and the primary sequence of SPC1 is correct. Because the protein is more rigid in nonaqueous medium as has been proved by others [2], we treated the complex of SPC1 with neat cyclohexane and then subjected it to X-ray diffraction analysis, and the result showed that all the 22 residues of SPC1 were located in the electron density map. So the topological structure of SPC1 has been determined, suggesting that crystal treatment with cyclohexane may be used as a method to determine the conformation of the disordered regions in protein crystal structures.
About this Structure
1G9I is a Protein complex structure of sequences from Bos taurus with and as ligands. Active as Trypsin, with EC number 3.4.21.4 Full crystallographic information is available from OCA.
Reference
X-Ray study on an artificial mung bean inhibitor complex with bovine beta-trypsin in neat cyclohexane., Zhu G, Huang Q, Zhu Y, Li Y, Chi C, Tang Y, Biochim Biophys Acta. 2001 Mar 9;1546(1):98-106. PMID:11257512
Page seeded by OCA on Thu Feb 21 12:47:39 2008
Categories: Bos taurus | Protein complex | Trypsin | Chi, C. | Huang, Q. | Li, Y. | Tang, Y. | Zhu, G. | Zhu, Y. | CA | SO4 | Organic media | Trypsin-inhibitor complex
