Template:STRUCTURE 1zpd

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Current revision (15:35, 27 July 2012) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1zpd]], resolution 1.86&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1zpd]], [[Resolution|resolution]] 1.86&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=DPX:MONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO}+ESTER'>DPX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=DPX:MONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO}+ESTER'>DPX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate_decarboxylase Pyruvate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.1 4.1.1.1] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate_decarboxylase Pyruvate decarboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.1 4.1.1.1] </span>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02776 TPP_enzyme_N], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02005 TPP_PDC_IPDC], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00205 TPP_enzyme_M], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3961 COG3961]</span>
 
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zpd OCA], [http://www.ebi.ac.uk/pdbsum/1zpd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zpd RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zpd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zpd OCA], [http://www.ebi.ac.uk/pdbsum/1zpd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zpd RCSB]</span>
|FUNCTION={{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0016831 | text = carboxy-lyase activity}}{{GO|id=GO:0030976 | text = thiamin pyrophosphate binding}}{{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0004737 | text = pyruvate decarboxylase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}
|FUNCTION={{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0016831 | text = carboxy-lyase activity}}{{GO|id=GO:0030976 | text = thiamin pyrophosphate binding}}{{GO|id=GO:0016829 | text = lyase activity}}{{GO|id=GO:0004737 | text = pyruvate decarboxylase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0003824 | text = catalytic activity}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA01 1Zpda01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA03 1Zpda03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA02 1Zpda02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB01 1Zpdb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB02 1Zpdb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB03 1Zpdb03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE02 1Zpde02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE03 1Zpde03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE01 1Zpde01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF03 1Zpdf03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF01 1Zpdf01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF02 1Zpdf02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012000 Ipr012000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000399 Ipr000399], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012001 Ipr012001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011766 Ipr011766], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012110 Ipr012110]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02775 PF02775], [http://pfam.sanger.ac.uk/family?acc=PF02776 PF02776], [http://pfam.sanger.ac.uk/family?acc=PF00205 PF00205]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31741 d1zpda1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31786 d1zpda3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31785 d1zpda2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31742 d1zpdb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31788 d1zpdb3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31787 d1zpdb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31790 d1zpde3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31789 d1zpde2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31743 d1zpde1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31744 d1zpdf1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31791 d1zpdf2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31792 d1zpdf3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06672 P06672]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA01 1Zpda01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA03 1Zpda03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdA02 1Zpda02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB01 1Zpdb01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB02 1Zpdb02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdB03 1Zpdb03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE02 1Zpde02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE03 1Zpde03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdE01 1Zpde01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF03 1Zpdf03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF01 1Zpdf01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1zpdF02 1Zpdf02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012000 Ipr012000], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000399 Ipr000399], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012001 Ipr012001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011766 Ipr011766], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012110 Ipr012110]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02775 PF02775], [http://pfam.sanger.ac.uk/family?acc=PF02776 PF02776], [http://pfam.sanger.ac.uk/family?acc=PF00205 PF00205]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31741 d1zpda1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31786 d1zpda3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31785 d1zpda2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31742 d1zpdb1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31788 d1zpdb3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31787 d1zpdb2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31790 d1zpde3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31789 d1zpde2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31743 d1zpde1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31744 d1zpdf1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31791 d1zpdf2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=31792 d1zpdf3]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P06672 P06672]</span>
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|CONSURF={{!}}-
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|uPDB=1ZPD|CONSURF={{!}}-
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"

Current revision

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1zpd, resolution 1.86Å ()
Ligands: , ,
Activity: Pyruvate decarboxylase, with EC number 4.1.1.1
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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