This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1ppb
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1ppb]], [[Resolution|resolution]] 1.92Å (<scene name='initialview01'>default scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1ppb]], [[Resolution|resolution]] 1.92Å (<scene name='initialview01'>default scene</scene>)}}} | ||
| - | | | + | |LIGAND= <scene name='pdbligand=0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE'>0G6</scene> |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span> | ||
| - | |NONSTDRES=<scene name='pdbligand=CH2:METHYLENE+GROUP'>CH2</scene>, <scene name='pdbligand=DPN:D-PHENYLALANINE'>DPN</scene> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppb OCA], [http://www.ebi.ac.uk/pdbsum/1ppb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ppb RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppb OCA], [http://www.ebi.ac.uk/pdbsum/1ppb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ppb RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00734 P00734]</span> | |SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00734 P00734]</span> | ||
| Line 15: | Line 14: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>L [x]</text> |
| - | <name> | + | <name>jmb_1ppb_L</name> |
| - | <title>toggle chain | + | <title>toggle chain L</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 26: | Line 25: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>H [x]</text> |
| - | <name> | + | <name>jmb_1ppb_H</name> |
| - | <title>toggle chain | + | <title>toggle chain H</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| Line 37: | Line 36: | ||
<jmolButton> | <jmolButton> | ||
<script></script> | <script></script> | ||
| - | <text> | + | <text>I [x]</text> |
| - | <name> | + | <name>jmb_1ppb_I</name> |
| - | <title>toggle chain | + | <title>toggle chain I</title> |
<jsscript>ConsurfChainButton(elementClicked)</jsscript> | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
<appendtargetsuffixtoid>true</appendtargetsuffixtoid> | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
Revision as of 15:53, 27 July 2012
| |||||||||
| 1ppb, resolution 1.92Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | |||||||||
| Activity: | Thrombin, with EC number 3.4.21.5 | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
