JMS/sandbox4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 18: Line 18:
<span style="color:pink;background-color:black;font-weight:bold;">pink</span>: Catalytic zinc coordinating residues
<span style="color:pink;background-color:black;font-weight:bold;">pink</span>: Catalytic zinc coordinating residues
-
red: substrate binding
+
<font color='red'><b>substrate binding</b></font>: substrate binding
-
purple: hydrogen binding
+
<font color='purple'><b>hydrogen binding</b></font>: hydrogen binding
-
light-blue:acetate
+
<font color='#20d0f0'><b>lacetate</b></font>light-blue:acetate =
In the following <scene name='1y7w/Com_view/8'>conserved region illustration</scene> of the carbonic anhydrase from ''Dunaliella salina'' (dCA II) structure. The regions corresponding to conserved regions <font color='blue'><b>(CRs, blue)</b></font>, variable regions <font color='lime'><b>(VRs, lime)</b></font>, and variable conserved regions <font color='red'><b>(VCRs, red)</b></font>, are positioned on the dCA II structure. The catalytic Zn<sup>2+</sup>, insertions and deletions in VCRs including L1 (the Zn binding loop), L4 (the Na-binding loop), L5, and two extended α-helices (E and G) are marked. N and C termini are labeled.
In the following <scene name='1y7w/Com_view/8'>conserved region illustration</scene> of the carbonic anhydrase from ''Dunaliella salina'' (dCA II) structure. The regions corresponding to conserved regions <font color='blue'><b>(CRs, blue)</b></font>, variable regions <font color='lime'><b>(VRs, lime)</b></font>, and variable conserved regions <font color='red'><b>(VCRs, red)</b></font>, are positioned on the dCA II structure. The catalytic Zn<sup>2+</sup>, insertions and deletions in VCRs including L1 (the Zn binding loop), L4 (the Na-binding loop), L5, and two extended α-helices (E and G) are marked. N and C termini are labeled.

Revision as of 11:19, 9 August 2012

The Halotolerant Carbonic Anhydrase

Structure of alpha-type carbonic anhydrase (dCAII) (PDB entry 1Y7W)

Drag the structure with the mouse to rotate
  1. Premkumar L, Greenblatt HM, Bageshwar UK, Savchenko T, Gokhman I, Sussman JL, Zamir A. Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog. Proc Natl Acad Sci U S A. 2005 May 24;102(21):7493-8. Epub 2005 May 13. PMID:15894606 doi:0502829102

Proteopedia Page Contributors and Editors (what is this?)

Joseph M. Steinberger

Personal tools