1jdq
From Proteopedia
(New page: 200px<br /><applet load="1jdq" size="450" color="white" frame="true" align="right" spinBox="true" caption="1jdq" /> '''Solution Structure of TM006 Protein from The...) |
|||
| Line 1: | Line 1: | ||
| - | [[Image:1jdq.jpg|left|200px]]<br /><applet load="1jdq" size=" | + | [[Image:1jdq.jpg|left|200px]]<br /><applet load="1jdq" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1jdq" /> | caption="1jdq" /> | ||
'''Solution Structure of TM006 Protein from Thermotoga maritima'''<br /> | '''Solution Structure of TM006 Protein from Thermotoga maritima'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The influx of genomic sequence information has led to the concept of | + | The influx of genomic sequence information has led to the concept of structural proteomics, the determination of protein structures on a genome-wide scale. Here we describe an approach to structural proteomics of small proteins using NMR spectroscopy. Over 500 small proteins from several organisms were cloned, expressed, purified, and evaluated by NMR. Although there was variability among proteomes, overall 20% of these proteins were found to be readily amenable to NMR structure determination. NMR sample preparation was centralized in one facility, and a distributive approach was used for NMR data collection and analysis. Twelve structures are reported here as part of this approach, which allowed us to infer putative functions for several conserved hypothetical proteins. |
==About this Structure== | ==About this Structure== | ||
| - | 1JDQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http:// | + | 1JDQ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JDQ OCA]. |
==Reference== | ==Reference== | ||
| Line 13: | Line 13: | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Thermotoga maritima]] | [[Category: Thermotoga maritima]] | ||
| - | [[Category: Arrowsmith, C | + | [[Category: Arrowsmith, C H.]] |
| - | [[Category: Denisov, A | + | [[Category: Denisov, A Y.]] |
[[Category: Finak, G.]] | [[Category: Finak, G.]] | ||
[[Category: Gehring, K.]] | [[Category: Gehring, K.]] | ||
| Line 23: | Line 23: | ||
[[Category: tm006]] | [[Category: tm006]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:21:34 2008'' |
Revision as of 11:21, 21 February 2008
|
Solution Structure of TM006 Protein from Thermotoga maritima
Overview
The influx of genomic sequence information has led to the concept of structural proteomics, the determination of protein structures on a genome-wide scale. Here we describe an approach to structural proteomics of small proteins using NMR spectroscopy. Over 500 small proteins from several organisms were cloned, expressed, purified, and evaluated by NMR. Although there was variability among proteomes, overall 20% of these proteins were found to be readily amenable to NMR structure determination. NMR sample preparation was centralized in one facility, and a distributive approach was used for NMR data collection and analysis. Twelve structures are reported here as part of this approach, which allowed us to infer putative functions for several conserved hypothetical proteins.
About this Structure
1JDQ is a Single protein structure of sequence from Thermotoga maritima. Full crystallographic information is available from OCA.
Reference
An NMR approach to structural proteomics., Yee A, Chang X, Pineda-Lucena A, Wu B, Semesi A, Le B, Ramelot T, Lee GM, Bhattacharyya S, Gutierrez P, Denisov A, Lee CH, Cort JR, Kozlov G, Liao J, Finak G, Chen L, Wishart D, Lee W, McIntosh LP, Gehring K, Kennedy MA, Edwards AM, Arrowsmith CH, Proc Natl Acad Sci U S A. 2002 Feb 19;99(4):1825-30. PMID:11854485
Page seeded by OCA on Thu Feb 21 13:21:34 2008
