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Template:STRUCTURE 1gnh

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Current revision (15:51, 21 November 2012) (edit) (undo)
 
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{{Structure
{{Structure
-
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1gnh]], resolution 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1gnh]], [[Resolution|resolution]] 3.00&Aring; (<scene name='initialview01'>default scene</scene>)}}}
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00152 PTX]</span>
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gnh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1gnh RCSB], [http://www.ebi.ac.uk/pdbsum/1gnh PDBsum]</span>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1gnh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1gnh OCA], [http://www.ebi.ac.uk/pdbsum/1gnh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1gnh RCSB]</span>
+
|FUNCTION={{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}
|FUNCTION={{GO|id=GO:0005488 | text = binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0046872 | text = metal ion binding}}
|PROCESS={{GO|id=GO:0006954 | text = inflammatory response}}{{GO|id=GO:0006953 | text = acute-phase response}}
|PROCESS={{GO|id=GO:0006954 | text = inflammatory response}}{{GO|id=GO:0006953 | text = acute-phase response}}
|COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}
|COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhA00 1Gnha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhB00 1Gnhb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhC00 1Gnhc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhD00 1Gnhd00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhE00 1Gnhe00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhF00 1Gnhf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhG00 1Gnhg00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhH00 1Gnhh00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhI00 1Gnhi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhJ00 1Gnhj00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001759 Ipr001759], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013320 Ipr013320], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008985 Ipr008985]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00354 PF00354]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24252 d1gnha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24253 d1gnhb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24254 d1gnhc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24255 d1gnhd_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24256 d1gnhe_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24257 d1gnhf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24258 d1gnhg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24259 d1gnhh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24260 d1gnhi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24261 d1gnhj_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02741 P02741]</span>
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhA00 1Gnha00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhB00 1Gnhb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhC00 1Gnhc00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhD00 1Gnhd00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhE00 1Gnhe00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhF00 1Gnhf00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhG00 1Gnhg00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhH00 1Gnhh00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhI00 1Gnhi00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1gnhJ00 1Gnhj00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001759 Ipr001759], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013320 Ipr013320], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008985 Ipr008985]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00354 PF00354]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24252 d1gnha_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24253 d1gnhb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24254 d1gnhc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24255 d1gnhd_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24256 d1gnhe_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24257 d1gnhf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24258 d1gnhg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24259 d1gnhh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24260 d1gnhi_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=24261 d1gnhj_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02741 P02741]</span>
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|FARESOURCES=<span class='plainlinks'>GeneCard : [http://www.genecards.org/cgi-bin/carddisp.pl?id=CRP CRP]</span>
+
|uPDB=1GNH|CONSURF={{!}}-
-
|CONSURF={{!}}-
+
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
{{!}} '''Toggle Conservation Colors:'''
{{!}} '''Toggle Conservation Colors:'''
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>A [x]</text>
 
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<name>jmb_1gnh_A</name>
 
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<title>toggle chain A</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
-
<jmolButton>
 
-
<script></script>
 
-
<text>B [x]</text>
 
-
<name>jmb_1gnh_B</name>
 
-
<title>toggle chain B</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
-
</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
-
<text>C [x]</text>
 
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<name>jmb_1gnh_C</name>
 
-
<title>toggle chain C</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>D [x]</text>
 
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<name>jmb_1gnh_D</name>
 
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<title>toggle chain D</title>
 
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
-
</jmolButton>
 
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</jmol>
 
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<jmol>
 
-
<jmolButton>
 
-
<script></script>
 
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<text>E [x]</text>
 
-
<name>jmb_1gnh_E</name>
 
-
<title>toggle chain E</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
-
</jmolButton>
 
-
</jmol>
 
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<jmol>
 
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<jmolButton>
 
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<script></script>
 
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<text>F [x]</text>
 
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<name>jmb_1gnh_F</name>
 
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<title>toggle chain F</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
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<jmol>
 
-
<jmolButton>
 
-
<script></script>
 
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<text>G [x]</text>
 
-
<name>jmb_1gnh_G</name>
 
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<title>toggle chain G</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
-
</jmolButton>
 
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</jmol>
 
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<jmol>
 
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<jmolButton>
 
-
<script></script>
 
-
<text>H [x]</text>
 
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<name>jmb_1gnh_H</name>
 
-
<title>toggle chain H</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
-
</jmolButton>
 
-
</jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script></script>
 
-
<text>I [x]</text>
 
-
<name>jmb_1gnh_I</name>
 
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<title>toggle chain I</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
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</jmolButton>
 
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</jmol>
 
-
<jmol>
 
-
<jmolButton>
 
-
<script></script>
 
-
<text>J [x]</text>
 
-
<name>jmb_1gnh_J</name>
 
-
<title>toggle chain J</title>
 
-
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 
-
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 
-
</jmolButton>
 
-
</jmol>
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1gnh, resolution 3.00Å ()
Ligands:
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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