1r1t
From Proteopedia
(New page: 200px<br /><applet load="1r1t" size="450" color="white" frame="true" align="right" spinBox="true" caption="1r1t, resolution 1.7Å" /> '''Crystal structure of ...) |
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| - | [[Image:1r1t.gif|left|200px]]<br /><applet load="1r1t" size=" | + | [[Image:1r1t.gif|left|200px]]<br /><applet load="1r1t" size="350" color="white" frame="true" align="right" spinBox="true" |
caption="1r1t, resolution 1.7Å" /> | caption="1r1t, resolution 1.7Å" /> | ||
'''Crystal structure of the cyanobacterial metallothionein repressor SmtB in the apo-form'''<br /> | '''Crystal structure of the cyanobacterial metallothionein repressor SmtB in the apo-form'''<br /> | ||
==Overview== | ==Overview== | ||
| - | The origin of metal ion selectivity by members of the SmtB/ArsR family of | + | The origin of metal ion selectivity by members of the SmtB/ArsR family of bacterial metal-sensing transcriptional repressors and the mechanism of negative allosteric regulation of DNA binding is poorly understood. Here, we report that two homologous zinc sensors, Staphylococcus aureus CzrA and cyanobacterial SmtB, are "winged" helix homodimeric DNA-binding proteins that bind Zn(II) to a pair of tetrahedral, interhelical binding sites, with two ligands derived from the alpha5 helix of one subunit, Asp84 O(delta1) (Asp104 in SmtB), His86 N(delta1) (His106), and two derived from the alpha5 helix of the other, His97' N(delta1) (His117') and His100' N(epsilon2) (Glu120'). Formation of the metal chelate drives a quaternary structural switch mediated by an intersubunit hydrogen-binding network that originates with the non-liganding N(epsilon2) face of His97 in CzrA (His117 in SmtB) that stabilizes a low-affinity, DNA-binding conformation. The structure of the Zn(1) SmtB homodimer shows that both metal-binding sites of the dimer must be occupied for the quaternary structural switch to occur. Thus, a critical zinc-ligating histidine residue obligatorily couples formation of the metal-sensing coordination chelate to changes in the conformation and dynamics of the putative DNA-binding helices. |
==About this Structure== | ==About this Structure== | ||
| - | 1R1T is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.]. Full crystallographic information is available from [http:// | + | 1R1T is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_sp. Synechococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R1T OCA]. |
==Reference== | ==Reference== | ||
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[[Category: Chen, X.]] | [[Category: Chen, X.]] | ||
[[Category: Eicken, C.]] | [[Category: Eicken, C.]] | ||
| - | [[Category: Giedroc, D | + | [[Category: Giedroc, D P.]] |
| - | [[Category: Koshlap, K | + | [[Category: Koshlap, K M.]] |
| - | [[Category: Pennella, M | + | [[Category: Pennella, M A.]] |
| - | [[Category: Sacchettini, J | + | [[Category: Sacchettini, J C.]] |
| - | [[Category: VanZile, M | + | [[Category: VanZile, M L.]] |
[[Category: dna binding]] | [[Category: dna binding]] | ||
[[Category: transcriptional regulation]] | [[Category: transcriptional regulation]] | ||
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[[Category: zinc]] | [[Category: zinc]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:46:12 2008'' |
Revision as of 12:46, 21 February 2008
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Crystal structure of the cyanobacterial metallothionein repressor SmtB in the apo-form
Overview
The origin of metal ion selectivity by members of the SmtB/ArsR family of bacterial metal-sensing transcriptional repressors and the mechanism of negative allosteric regulation of DNA binding is poorly understood. Here, we report that two homologous zinc sensors, Staphylococcus aureus CzrA and cyanobacterial SmtB, are "winged" helix homodimeric DNA-binding proteins that bind Zn(II) to a pair of tetrahedral, interhelical binding sites, with two ligands derived from the alpha5 helix of one subunit, Asp84 O(delta1) (Asp104 in SmtB), His86 N(delta1) (His106), and two derived from the alpha5 helix of the other, His97' N(delta1) (His117') and His100' N(epsilon2) (Glu120'). Formation of the metal chelate drives a quaternary structural switch mediated by an intersubunit hydrogen-binding network that originates with the non-liganding N(epsilon2) face of His97 in CzrA (His117 in SmtB) that stabilizes a low-affinity, DNA-binding conformation. The structure of the Zn(1) SmtB homodimer shows that both metal-binding sites of the dimer must be occupied for the quaternary structural switch to occur. Thus, a critical zinc-ligating histidine residue obligatorily couples formation of the metal-sensing coordination chelate to changes in the conformation and dynamics of the putative DNA-binding helices.
About this Structure
1R1T is a Single protein structure of sequence from Synechococcus sp.. Full crystallographic information is available from OCA.
Reference
A metal-ligand-mediated intersubunit allosteric switch in related SmtB/ArsR zinc sensor proteins., Eicken C, Pennella MA, Chen X, Koshlap KM, VanZile ML, Sacchettini JC, Giedroc DP, J Mol Biol. 2003 Oct 31;333(4):683-95. PMID:14568530
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