This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2dd2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{Seed}}
 
[[Image:2dd2.png|left|200px]]
[[Image:2dd2.png|left|200px]]
-
<!--
 
-
The line below this paragraph, containing "STRUCTURE_2dd2", creates the "Structure Box" on the page.
 
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
 
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
 
-
or leave the SCENE parameter empty for the default display.
 
-
-->
 
{{STRUCTURE_2dd2| PDB=2dd2 | SCENE= }}
{{STRUCTURE_2dd2| PDB=2dd2 | SCENE= }}
===An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack===
===An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack===
- 
-
<!--
 
-
The line below this paragraph, {{ABSTRACT_PUBMED_16734425}}, adds the Publication Abstract to the page
 
-
(as it appears on PubMed at http://www.pubmed.gov), where 16734425 is the PubMed ID number.
 
-
-->
 
{{ABSTRACT_PUBMED_16734425}}
{{ABSTRACT_PUBMED_16734425}}
==About this Structure==
==About this Structure==
-
2DD2 is a 2 chains structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DD2 OCA].
+
[[2dd2]] is a 2 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DD2 OCA].
==Reference==
==Reference==
-
<ref group="xtra">PMID:16734425</ref><references group="xtra"/>
+
<ref group="xtra">PMID:016734425</ref><references group="xtra"/>
[[Category: Chen, G.]]
[[Category: Chen, G.]]
[[Category: Kennedy, S D.]]
[[Category: Kennedy, S D.]]
Line 33: Line 21:
[[Category: Dynamic]]
[[Category: Dynamic]]
[[Category: Kink-turn]]
[[Category: Kink-turn]]
 +
[[Category: Rna]]
[[Category: Rna secondary structure]]
[[Category: Rna secondary structure]]
[[Category: Sheared aa pair]]
[[Category: Sheared aa pair]]
[[Category: Sheared ga pair]]
[[Category: Sheared ga pair]]
[[Category: Thermodynamic]]
[[Category: Thermodynamic]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 22 20:08:11 2009''
 

Revision as of 09:14, 6 January 2013

Template:STRUCTURE 2dd2

An alternating sheared AA pair in 5'GGUGAAGGCU/3'PCCGAAGCCG: I. The major conformation with A6/A15/A16 stack

Template:ABSTRACT PUBMED 16734425

About this Structure

2dd2 is a 2 chain structure. Full experimental information is available from OCA.

Reference

  • Chen G, Kennedy SD, Qiao J, Krugh TR, Turner DH. An alternating sheared AA pair and elements of stability for a single sheared purine-purine pair flanked by sheared GA pairs in RNA. Biochemistry. 2006 Jun 6;45(22):6889-903. PMID:16734425 doi:10.1021/bi0524464

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools