3iys
From Proteopedia
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{{STRUCTURE_3iys| PDB=3iys | SCENE= }} | {{STRUCTURE_3iys| PDB=3iys | SCENE= }} | ||
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===Homology model of avian polyomavirus asymmetric unit=== | ===Homology model of avian polyomavirus asymmetric unit=== | ||
| + | {{ABSTRACT_PUBMED_21239031}} | ||
| - | + | ==Function== | |
| - | + | [[http://www.uniprot.org/uniprot/VP1_BFPYV VP1_BFPYV]] Forms an icosahedral capsid with a T=7 symmetry and a 46-48 nm diameter. The capsid is composed of 72 pentamers linked to each other by disulfide bonds and associated with VP2 or VP3 proteins. Interacts with sialic acids on the cell surface to provide virion attachment to target cell. Once attached, the virion is internalized by endocytosis and traffics to the endoplasmic reticulum. Inside the endoplasmic reticulum, the protein folding machinery isomerizes VP1 interpentamer disulfide bonds, thereby triggering initial uncoating. Next, the virion uses the endoplasmic reticulum-associated degradation machinery to probably translocate in the cytosol before reaching the nucleus. Nuclear entry of the viral DNA involves the selective exposure and importin recognition of VP2/Vp3 nuclear localization signal. In late phase of infection, neo-synthesized VP1 encapsulates replicated genomic DNA in the nucleus, and participates in rearranging nucleosomes around the viral DNA (By similarity). | |
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==About this Structure== | ==About this Structure== | ||
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==Reference== | ==Reference== | ||
| - | <ref group="xtra">PMID: | + | <ref group="xtra">PMID:021239031</ref><references group="xtra"/><references/> |
[[Category: Budgerigar fledgling disease polyomavirus]] | [[Category: Budgerigar fledgling disease polyomavirus]] | ||
[[Category: Atwood, W J.]] | [[Category: Atwood, W J.]] | ||
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[[Category: Swenson, R D.]] | [[Category: Swenson, R D.]] | ||
[[Category: Xing, L.]] | [[Category: Xing, L.]] | ||
| + | [[Category: Apv]] | ||
| + | [[Category: Avian]] | ||
| + | [[Category: Icosahedral virus]] | ||
| + | [[Category: Polyomavirus]] | ||
| + | [[Category: Virus]] | ||
Revision as of 09:20, 27 March 2013
Contents |
Homology model of avian polyomavirus asymmetric unit
Template:ABSTRACT PUBMED 21239031
Function
[VP1_BFPYV] Forms an icosahedral capsid with a T=7 symmetry and a 46-48 nm diameter. The capsid is composed of 72 pentamers linked to each other by disulfide bonds and associated with VP2 or VP3 proteins. Interacts with sialic acids on the cell surface to provide virion attachment to target cell. Once attached, the virion is internalized by endocytosis and traffics to the endoplasmic reticulum. Inside the endoplasmic reticulum, the protein folding machinery isomerizes VP1 interpentamer disulfide bonds, thereby triggering initial uncoating. Next, the virion uses the endoplasmic reticulum-associated degradation machinery to probably translocate in the cytosol before reaching the nucleus. Nuclear entry of the viral DNA involves the selective exposure and importin recognition of VP2/Vp3 nuclear localization signal. In late phase of infection, neo-synthesized VP1 encapsulates replicated genomic DNA in the nucleus, and participates in rearranging nucleosomes around the viral DNA (By similarity).
About this Structure
3iys is a 6 chain structure with sequence from Budgerigar fledgling disease polyomavirus. Full crystallographic information is available from OCA.
Reference
- Shen PS, Enderlein D, Nelson CD, Carter WS, Kawano M, Xing L, Swenson RD, Olson NH, Baker TS, Cheng RH, Atwood WJ, Johne R, Belnap DM. The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4. Virology. 2011 Jan 14. PMID:21239031 doi:10.1016/j.virol.2010.12.005
