2fjt
From Proteopedia
(New page: 200px<br /><applet load="2fjt" size="350" color="white" frame="true" align="right" spinBox="true" caption="2fjt, resolution 1.901Å" /> '''Adenylyl cyclase cl...) |
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==Overview== | ==Overview== | ||
| - | The crystal structure of the class IV adenylyl cyclase (AC) from Yersinia | + | The crystal structure of the class IV adenylyl cyclase (AC) from Yersinia pestis (Yp) is reported at 1.9 A resolution. The class IV AC fold is distinct from the previously described folds for class II and class III ACs. The dimeric AC-IV folds into an antiparallel eight-stranded barrel whose connectivity has been seen in only three previous structures: yeast RNA triphosphatase and two proteins of unknown function from Pyrococcus furiosus and Vibrio parahaemolyticus. Eight highly conserved ionic residues E10, E12, K14, R63, K76, K111, D126, and E136 lie in the barrel core and form the likely binding sites for substrate and divalent cations. A phosphate ion is observed bound to R63, K76, K111, and R113 near the center of the conserved cluster. Unlike the AC-II and AC-III active sites that utilize two-Asp motifs for cation binding, the AC-IV active site is relatively enriched in glutamate and features an ExE motif as its most conserved element. Homologs of Y. pestis AC-IV, including human thiamine triphosphatase, span the three kingdoms of life and delineate an ancient family of phosphonucleotide processing enzymes. |
==About this Structure== | ==About this Structure== | ||
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[[Category: Single protein]] | [[Category: Single protein]] | ||
[[Category: Yersinia pestis]] | [[Category: Yersinia pestis]] | ||
| - | [[Category: Gallagher, D | + | [[Category: Gallagher, D T.]] |
[[Category: Heroux, A.]] | [[Category: Heroux, A.]] | ||
| - | [[Category: Kim, S | + | [[Category: Kim, S K.]] |
| - | [[Category: Reddy, P | + | [[Category: Reddy, P T.]] |
[[Category: Robinson, H.]] | [[Category: Robinson, H.]] | ||
| - | [[Category: Smith, N | + | [[Category: Smith, N N.]] |
[[Category: SO4]] | [[Category: SO4]] | ||
[[Category: cyclase; beta barrel; dimer]] | [[Category: cyclase; beta barrel; dimer]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:22:05 2008'' |
Revision as of 15:22, 21 February 2008
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Adenylyl cyclase class iv from Yersinia pestis
Overview
The crystal structure of the class IV adenylyl cyclase (AC) from Yersinia pestis (Yp) is reported at 1.9 A resolution. The class IV AC fold is distinct from the previously described folds for class II and class III ACs. The dimeric AC-IV folds into an antiparallel eight-stranded barrel whose connectivity has been seen in only three previous structures: yeast RNA triphosphatase and two proteins of unknown function from Pyrococcus furiosus and Vibrio parahaemolyticus. Eight highly conserved ionic residues E10, E12, K14, R63, K76, K111, D126, and E136 lie in the barrel core and form the likely binding sites for substrate and divalent cations. A phosphate ion is observed bound to R63, K76, K111, and R113 near the center of the conserved cluster. Unlike the AC-II and AC-III active sites that utilize two-Asp motifs for cation binding, the AC-IV active site is relatively enriched in glutamate and features an ExE motif as its most conserved element. Homologs of Y. pestis AC-IV, including human thiamine triphosphatase, span the three kingdoms of life and delineate an ancient family of phosphonucleotide processing enzymes.
About this Structure
2FJT is a Single protein structure of sequence from Yersinia pestis with as ligand. Active as Adenylate cyclase, with EC number 4.6.1.1 Full crystallographic information is available from OCA.
Reference
Structure of the class IV adenylyl cyclase reveals a novel fold., Gallagher DT, Smith NN, Kim SK, Heroux A, Robinson H, Reddy PT, J Mol Biol. 2006 Sep 8;362(1):114-22. Epub 2006 Aug 14. PMID:16905149
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