This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ghw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 4: Line 4:
==Overview==
==Overview==
-
Severe acute respiratory syndrome (SARS) is a newly emerged infectious, disease that caused pandemic spread in 2003. The etiological agent of SARS, is a novel coronavirus (SARS-CoV). The coronaviral surface spike protein S, is a type I transmembrane glycoprotein that mediates initial host binding, via the cell surface receptor angiotensin-converting enzyme 2 (ACE2), as, well as the subsequent membrane fusion events required for cell entry., Here we report the crystal structure of the S1 receptor binding domain, (RBD) in complex with a neutralizing antibody, 80R, at 2.3 A resolution, as well as the structure of the uncomplexed S1 RBD at 2.2 A resolution. We, show that the 80R-binding epitope on the S1 RBD overlaps very closely with, the ACE2-binding site, providing a rationale for the strong binding and, broad neutralizing ability of the antibody. We provide a structural basis, for the differential effects of certain mutations in the spike protein on, 80R versus ACE2 binding, including escape mutants, which should facilitate, the design of immunotherapeutics to treat a future SARS outbreak. We, further show that the RBD of S1 forms dimers via an extensive interface, that is disrupted in receptor- and antibody-bound crystal structures, and, we propose a role for the dimer in virus stability and infectivity.
+
Severe acute respiratory syndrome (SARS) is a newly emerged infectious disease that caused pandemic spread in 2003. The etiological agent of SARS is a novel coronavirus (SARS-CoV). The coronaviral surface spike protein S is a type I transmembrane glycoprotein that mediates initial host binding via the cell surface receptor angiotensin-converting enzyme 2 (ACE2), as well as the subsequent membrane fusion events required for cell entry. Here we report the crystal structure of the S1 receptor binding domain (RBD) in complex with a neutralizing antibody, 80R, at 2.3 A resolution, as well as the structure of the uncomplexed S1 RBD at 2.2 A resolution. We show that the 80R-binding epitope on the S1 RBD overlaps very closely with the ACE2-binding site, providing a rationale for the strong binding and broad neutralizing ability of the antibody. We provide a structural basis for the differential effects of certain mutations in the spike protein on 80R versus ACE2 binding, including escape mutants, which should facilitate the design of immunotherapeutics to treat a future SARS outbreak. We further show that the RBD of S1 forms dimers via an extensive interface that is disrupted in receptor- and antibody-bound crystal structures, and we propose a role for the dimer in virus stability and infectivity.
==About this Structure==
==About this Structure==
Line 15: Line 15:
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Farzan, M.]]
[[Category: Farzan, M.]]
-
[[Category: Hwang, W.C.]]
+
[[Category: Hwang, W C.]]
[[Category: Jaroszewski, L.]]
[[Category: Jaroszewski, L.]]
-
[[Category: Liddington, R.C.]]
+
[[Category: Liddington, R C.]]
[[Category: Lin, Y.]]
[[Category: Lin, Y.]]
-
[[Category: Marasco, W.A.]]
+
[[Category: Marasco, W A.]]
[[Category: Santelli, E.]]
[[Category: Santelli, E.]]
[[Category: Stec, B.]]
[[Category: Stec, B.]]
Line 28: Line 28:
[[Category: sars]]
[[Category: sars]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Feb 15 17:28:02 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:31:50 2008''

Revision as of 15:31, 21 February 2008


2ghw, resolution 2.30Å

Drag the structure with the mouse to rotate

Crystal structure of SARS spike protein receptor binding domain in complex with a neutralizing antibody, 80R

Overview

Severe acute respiratory syndrome (SARS) is a newly emerged infectious disease that caused pandemic spread in 2003. The etiological agent of SARS is a novel coronavirus (SARS-CoV). The coronaviral surface spike protein S is a type I transmembrane glycoprotein that mediates initial host binding via the cell surface receptor angiotensin-converting enzyme 2 (ACE2), as well as the subsequent membrane fusion events required for cell entry. Here we report the crystal structure of the S1 receptor binding domain (RBD) in complex with a neutralizing antibody, 80R, at 2.3 A resolution, as well as the structure of the uncomplexed S1 RBD at 2.2 A resolution. We show that the 80R-binding epitope on the S1 RBD overlaps very closely with the ACE2-binding site, providing a rationale for the strong binding and broad neutralizing ability of the antibody. We provide a structural basis for the differential effects of certain mutations in the spike protein on 80R versus ACE2 binding, including escape mutants, which should facilitate the design of immunotherapeutics to treat a future SARS outbreak. We further show that the RBD of S1 forms dimers via an extensive interface that is disrupted in receptor- and antibody-bound crystal structures, and we propose a role for the dimer in virus stability and infectivity.

About this Structure

2GHW is a Single protein structure of sequence from Homo sapiens and Human sars coronavirus with as ligand. Full crystallographic information is available from OCA.

Reference

Structural basis of neutralization by a human anti-severe acute respiratory syndrome spike protein antibody, 80R., Hwang WC, Lin Y, Santelli E, Sui J, Jaroszewski L, Stec B, Farzan M, Marasco WA, Liddington RC, J Biol Chem. 2006 Nov 10;281(45):34610-6. Epub 2006 Sep 5. PMID:16954221

Page seeded by OCA on Thu Feb 21 17:31:50 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools