4bgd

From Proteopedia

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'''Unreleased structure'''
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{{STRUCTURE_4bgd| PDB=4bgd | SCENE= }}
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===Crystal structure of Brr2 in complex with the Jab1/MPN domain of Prp8===
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{{ABSTRACT_PUBMED_23727230}}
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The entry 4bgd is ON HOLD until Paper Publication
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==Function==
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[[http://www.uniprot.org/uniprot/PRP8_YEAST PRP8_YEAST]] Required for pre-spliceosome formation, which is the first step of pre-mRNA splicing. This protein is associated with snRNP U5. Has a role in branch site-3' splice site selection. Associates with the branch site-3' splice 3'-exon region. Also has a role in cell cycle.<ref>PMID:2835658</ref> <ref>PMID:9150140</ref> <ref>PMID:12773561</ref> <ref>PMID:18779563</ref>
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Authors: Nguyen, T.H.D., Li, J., Nagai, K.
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==About this Structure==
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[[4bgd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BGD OCA].
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Description: Crystal structure of a splicing complex
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==Reference==
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<ref group="xtra">PMID:023727230</ref><references group="xtra"/><references/>
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[[Category: RNA helicase]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Li, J.]]
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[[Category: Nagai, K.]]
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[[Category: Nguyen, T H.D.]]
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[[Category: Retinitis pigmentosa]]
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[[Category: Rna helicase]]
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[[Category: Spliceosome]]
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[[Category: Transcription]]
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[[Category: U5 snrnp]]

Revision as of 16:17, 19 June 2013

Template:STRUCTURE 4bgd

Contents

Crystal structure of Brr2 in complex with the Jab1/MPN domain of Prp8

Template:ABSTRACT PUBMED 23727230

Function

[PRP8_YEAST] Required for pre-spliceosome formation, which is the first step of pre-mRNA splicing. This protein is associated with snRNP U5. Has a role in branch site-3' splice site selection. Associates with the branch site-3' splice 3'-exon region. Also has a role in cell cycle.[1] [2] [3] [4]

About this Structure

4bgd is a 2 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.

Reference

  • Nguyen TH, Li J, Galej WP, Oshikane H, Newman AJ, Nagai K. Structural Basis of Brr2-Prp8 Interactions and Implications for U5 snRNP Biogenesis and the Spliceosome Active Site. Structure. 2013 May 29. pii: S0969-2126(13)00129-9. doi:, 10.1016/j.str.2013.04.017. PMID:23727230 doi:10.1016/j.str.2013.04.017
  1. ↑ Jackson SP, Lossky M, Beggs JD. Cloning of the RNA8 gene of Saccharomyces cerevisiae, detection of the RNA8 protein, and demonstration that it is essential for nuclear pre-mRNA splicing. Mol Cell Biol. 1988 Mar;8(3):1067-75. PMID:2835658
  2. ↑ Abovich N, Rosbash M. Cross-intron bridging interactions in the yeast commitment complex are conserved in mammals. Cell. 1997 May 2;89(3):403-12. PMID:9150140
  3. ↑ McPheeters DS, Muhlenkamp P. Spatial organization of protein-RNA interactions in the branch site-3' splice site region during pre-mRNA splicing in yeast. Mol Cell Biol. 2003 Jun;23(12):4174-86. PMID:12773561
  4. ↑ Yang K, Zhang L, Xu T, Heroux A, Zhao R. Crystal structure of the beta-finger domain of Prp8 reveals analogy to ribosomal proteins. Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):13817-22. Epub 2008 Sep 8. PMID:18779563

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