User:Wayne Decatur/4ay9 pymol
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(Difference between revisions)
(New page: ==Making images with 4ay9== ===In PyMol=== I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not...) |
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===In PyMol=== | ===In PyMol=== | ||
I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it. | I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it. | ||
| + | |||
| + | <code> | ||
| + | alter 14-18/, ss='L' # assign residues 14-18 as loop | ||
| + | rebuild | ||
| + | </code> | ||
| + | |||
==Pages with supporting information== | ==Pages with supporting information== | ||
Revision as of 20:44, 4 July 2013
Making images with 4ay9
In PyMol
I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it.
alter 14-18/, ss='L' # assign residues 14-18 as loop
rebuild
Pages with supporting information
Bold text
