User:Wayne Decatur/4ay9 pymol

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m
m (In PyMol)
Line 3: Line 3:
I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it.
I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it.
-
<code>
+
<pre>
alter 14-18/, ss='L' # assign residues 14-18 as loop
alter 14-18/, ss='L' # assign residues 14-18 as loop
rebuild
rebuild
-
</code>
+
</pre>
-
 
+
==Pages with supporting information==
==Pages with supporting information==

Revision as of 21:12, 4 July 2013

Making images with 4ay9

In PyMol

I found that for some reason part of the structure that in the paper is represented as a loop, PyMol was making a helix. It was small and not overly noticeable but to perfect images for Stacia's slides. I wanted to deal with it.

alter 14-18/, ss='L'             # assign residues 14-18 as loop
rebuild    

Pages with supporting information

Bold text

Proteopedia Page Contributors and Editors (what is this?)

Wayne Decatur

Personal tools