Chloride Intracellular Channel Protein 2

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<StructureSection load='2r5g' size='450' side='right' scene='Chloride_Intracellular_Channel_Protein_2/Structintro/2' caption=''>
[[Image:Nfig001.jpg|300px|left|thumb| Localization of the different structures of CLIC2]]
[[Image:Nfig001.jpg|300px|left|thumb| Localization of the different structures of CLIC2]]
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<applet load='2r5g' size='500' frame='true' align='right' caption='CLIC2 ([[2r5g]]) resolution 1.86 Å' scene='Chloride_Intracellular_Channel_Protein_2/Structintro/2'/>
 
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CLIC proteins are a new class of soluble and membrane-bound proteins that have been grouped together on the basis of their sequence similarity. The proteins were named CLIC because the first members of this family to be characterized formed intracellular chloride channels. <ref>PMID:9339381</ref> They display broad tissue and cellular distribution. They have been implicated in kidney function, cell division, and bone resorption. <ref>PMID:18007051</ref> They differ from the other classes of chloride ion channels in primary structure and in the transmembrane regions of the tertiary structure. Since the first member of CLIC, p64 (CLIC5), was discovered in bovine kidney, several members of the CLIC family have been found in other tissues from many species, including NCC27 (CLIC1), CLIC2, CLIC3, mtCLIC (CLIC4), and parchorin (CLIC6). <ref>PMID:19356589</ref> With the exception of p64 and parchorin, these proteins contain a conserved region of approximately 240 residues. <ref>PMID:17945253 </ref>
CLIC proteins are a new class of soluble and membrane-bound proteins that have been grouped together on the basis of their sequence similarity. The proteins were named CLIC because the first members of this family to be characterized formed intracellular chloride channels. <ref>PMID:9339381</ref> They display broad tissue and cellular distribution. They have been implicated in kidney function, cell division, and bone resorption. <ref>PMID:18007051</ref> They differ from the other classes of chloride ion channels in primary structure and in the transmembrane regions of the tertiary structure. Since the first member of CLIC, p64 (CLIC5), was discovered in bovine kidney, several members of the CLIC family have been found in other tissues from many species, including NCC27 (CLIC1), CLIC2, CLIC3, mtCLIC (CLIC4), and parchorin (CLIC6). <ref>PMID:19356589</ref> With the exception of p64 and parchorin, these proteins contain a conserved region of approximately 240 residues. <ref>PMID:17945253 </ref>
CLIC proteins can localize to distinct cellular membranes, including the nuclear membrane, lysosomal membranes, mitochondria, Golgi membranes, cell–cell junctions, and the plasma membrane. <ref>PMID:18007051</ref>
CLIC proteins can localize to distinct cellular membranes, including the nuclear membrane, lysosomal membranes, mitochondria, Golgi membranes, cell–cell junctions, and the plasma membrane. <ref>PMID:18007051</ref>
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== Structure ==
== Structure ==
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[[Image:0.jpg]]
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[[Image:0.jpg|left|300px|thumb]]
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''Two different forms of CLIC2 which differ by 18 residues: form A (blue) and form B (grey).
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''Two different forms of CLIC2 which differ by 18 residues: form A (blue) and form B (grey).''
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''
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<applet load='2r5g' size='500' frame='true' align='right' caption='CLIC2 ([[2r5g]]) resolution 1.86 Å' />
 
Contrary to each members of the CLICs family, CLIC 2 is a monomer, no matter if it is oxydated or reduiced. It is composed of 247 amino acids, has a weight of 28.4kDa and an isoelectric point at 5.44(crystal structure). The CLIC2 molecule is box shaped (60×60×35 Å) and consists of a four strand core and two helices on one side. Comparing sequence similarities, the core is supposed to adopt the canonical fold of the glutathione S-transferase (GST) superfamily. This has been confirmed by the crystal structure determination of human CLIC1 at 1.4 Å resolution. Then, by analyzing CLIC genes sequences, this protein appears to have two potential transmembrane domains that would correspond to helices α1 and α6 in the GST-like structure of the soluble form. Thanks to immunological, electrophysical and proteolysis studies, we can say that membrane form of CLIC proteins cross the lipid bilayer an odd number of times.
Contrary to each members of the CLICs family, CLIC 2 is a monomer, no matter if it is oxydated or reduiced. It is composed of 247 amino acids, has a weight of 28.4kDa and an isoelectric point at 5.44(crystal structure). The CLIC2 molecule is box shaped (60×60×35 Å) and consists of a four strand core and two helices on one side. Comparing sequence similarities, the core is supposed to adopt the canonical fold of the glutathione S-transferase (GST) superfamily. This has been confirmed by the crystal structure determination of human CLIC1 at 1.4 Å resolution. Then, by analyzing CLIC genes sequences, this protein appears to have two potential transmembrane domains that would correspond to helices α1 and α6 in the GST-like structure of the soluble form. Thanks to immunological, electrophysical and proteolysis studies, we can say that membrane form of CLIC proteins cross the lipid bilayer an odd number of times.
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===Similarity to other CLIC structures===
===Similarity to other CLIC structures===
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<applet load='1K0M' size='300' frame='true' align='right' caption='CLIC1 ([[1k0m]]) resolution 1.40Å (initial scene)
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CLIC4 ([[2ahe]]) resolution 1.80Å (residues 58-75)' />
CLIC4 ([[2ahe]]) resolution 1.80Å (residues 58-75)' />
An interesting thing to do is to compare CLIC2 to other CLIC proteins to understand why they are distinguished.
An interesting thing to do is to compare CLIC2 to other CLIC proteins to understand why they are distinguished.

Revision as of 09:30, 10 July 2013

PDB ID 2r5g

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