User:Alice Harmon/Notes
From Proteopedia
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[[3ujk]] – AtPP2C <br /> | [[3ujk]] – AtPP2C <br /> | ||
| - | ===Pyr/PYL/RCAR structures=== | ||
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| - | '''APO structures'''<br> | ||
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| - | [[3k3k]], AtPyr1 dimer, one monomer is bound to ABA and the other unliganded<br> | ||
| - | [[3kay]], apo AtPYL1 <br> | ||
| - | [[3kdh]], [[3kaz]], [[3kl1]] apo AtPYL2<br> | ||
| - | [[3klx]], apo ATPYL3<br> | ||
| - | [[4jdl]], Apo PYL5<br> | ||
| - | [[3rt2]], [[3uqh]] apo PYL10<br> | ||
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| - | '''Structures with (+)-ABA'''<br> | ||
| - | [[3k90]], PYR1.ABA<br> | ||
| - | [[3k3k]], AtPyr1 dimer, one monomer is bound to ABA and the other unliganded<br> | ||
| - | [[3jrs]], AtPYL1.ABA<br> | ||
| - | [[3kdi]], [[3kb0]] AtPYL2.ABA<br> | ||
| - | [[4dsb]], [[4dsc]] AtPYL3 with ABA<br> | ||
| - | [[3oqu]], PYL9.ABA<br> | ||
| - | [[3r6p]], PYL10.ABA<br> | ||
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| - | '''Structures with (-)-ABA'''<br> | ||
| - | [[4jda]], PYL3 with (-)-ABA<br> | ||
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| - | '''Structures with pyrabactin'''<br> | ||
| - | [[3njo]], PYR1.Pyrabactin<br> | ||
| - | [[3nef]], [[3neg]], [[3nr4]] PYL1.pyrabactin<br> | ||
| - | [[3nj0]], [[3ns2]] PYL2.Pyrabactin<br> | ||
| - | [[3nj1]], PYL2 V114I mutant.Pyrabactin <br> | ||
| - | [[3nmh]], AtPYL2 in complex with pyrabactin<br> | ||
| - | [[3nmp]], AtPYL2 mutant A93F in complex with pyrabactin<br> | ||
| - | [[3oji]], PYL3 with pyrabactin(?)<br> | ||
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| - | '''Structures with (+)-ABA or homolog and a PP2C'''<br> | ||
| - | [[3qn1]], PYR1.ABA - HAB1<br> | ||
| - | [[3zvu]], PYR1 H60P mutant .ABA - HAB1<br> | ||
| - | [[3kb3]], AtPYL1.ABA in complex with HAB1<br> | ||
| - | [[3jrq]], [[3kdj]] AtPYL1.ABA in complex with ABI1<br> | ||
| - | [[3ujl]], PYL2.ABA - ABI2<br> | ||
| - | [[4lga]], [[4lgb]] PYL2.ABA mimic- HAB1<br> | ||
| - | [[4ds8]], AtPYL3.ABA complex with HAB1 | ||
| - | [[3rt0]], PYL10.ABA - HAB1<br> | ||
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| - | '''Structures with pyrabactin and a PP2C'''<br> | ||
| - | [[4la7]], [[4lg5]] PYL2.Quinabactin - HAB1<br> | ||
| - | [[3nmn]], AtPYL1.pyrabactin in complex with ABI1<br> | ||
| - | [[3nmt]], AtPYL2 mutant A93F.pyrabactin in complex with type 2C protein phosphatase HAB1<br> | ||
| - | [[3nmv]], AtPYL2 mutant A93F.pyrabactin in complex with type 2C protein phosphatase ABI1<br> | ||
Revision as of 14:20, 5 October 2013
Contents |
Pages needed
edit calmodulin pages
edit Ca2+/Calmodulin dependent protein kinase page
Create CaM-binding motifs
also http://en.wikipedia.org/wiki/Calmodulin
see Proteopedia:Policy
For PYR-ABI1 page:
PP2C structures
1a6q – hPP2C
2iq1 – hPP2C κ
2p8e – hPP2C β
2cm1 – PP2C + Mn – Micobacterium tuberculosis
3d8k – PP2C – Toxoplasma gondii
3jrq, 3kdj, 3nmn – AtPP2C + Pyl1 – Arabidopsis thaliana
3nmt, 3kb3, 3nmv, 3ujl – AtPP2C + Pyl2
4ds8 – AtPP2C + Pyl3 + Mn
3rt0 – AtPP2C (mutant) + Pyl10
3qn1, 3zvu – AtPP2C + Pyr1
3ujg – AtPP2C + SNRK2
3ujk – AtPP2C
add link to kinase domain page on
PKA pages
Goodsells PKA article on PDB website
Editing issues
HTML tags don't work inside scene tags:
superscript works fine here: Ca2+-bound CAD
but not here:
|
In the green tag, the tag Ca<sup>2+</sup> and the text before it are not rendered.
headings that are in scrollable sections are not included in the the page index
Can load scene using a different structure into a frame, but can't change the caption of the frame.
ABA signaling
Clearest picture of Pyr1 gate - latch is in Annu Reviews article
unused:
