Sandbox Reserved 794

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Phosphoglycerate kinase's <scene name='56/563206/Pgk_hbonds/1'>hydrogen bonds</scene> are shown in orange. Majority of the hydrogen bonds are parallel. One can see the parallel hydrogen bonds by observing the alpha helices and beta sheets. The parallel conformation leads to a diagonal bond where as the antiparallel conformation leads to more straight up and down bonds. Disulfide bonds are not present in phosphoglycerate kinase.
Phosphoglycerate kinase's <scene name='56/563206/Pgk_hbonds/1'>hydrogen bonds</scene> are shown in orange. Majority of the hydrogen bonds are parallel. One can see the parallel hydrogen bonds by observing the alpha helices and beta sheets. The parallel conformation leads to a diagonal bond where as the antiparallel conformation leads to more straight up and down bonds. Disulfide bonds are not present in phosphoglycerate kinase.
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The <scene name='56/563206/Pgk_hydrophobphil/1'>hydrophobic and hydrophilic</scene> residues are shown with hydrophobic in grey and hydrophilic in red. The hydrophobic residues do not like water, so they are typically found on the inside of the protein. The hydrophilic residues are usually found on the outside of the protein.
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The <scene name='56/563206/Pgk_hydrophobicres/2'>hydrophobic residues</scene> are showed in grey. Hydrophobic residues are usually found inside the protein since they dislike water interactions. The <scene name='56/563206/Pgk_hydrophobphil/1'>hydrophobic and hydrophilic</scene> residues are shown with hydrophobic in grey and hydrophilic in red. The hydrophilic residues are usually found on the outside of the protein.

Revision as of 23:53, 8 October 2013

This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807.
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phophoglycerate kinase

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The of phosphoglycerate kinase shows alpha helices (purple) and beta sheets (green).

Phosphoglycerate kinase's are shown in orange. Majority of the hydrogen bonds are parallel. One can see the parallel hydrogen bonds by observing the alpha helices and beta sheets. The parallel conformation leads to a diagonal bond where as the antiparallel conformation leads to more straight up and down bonds. Disulfide bonds are not present in phosphoglycerate kinase.


The are showed in grey. Hydrophobic residues are usually found inside the protein since they dislike water interactions. The residues are shown with hydrophobic in grey and hydrophilic in red. The hydrophilic residues are usually found on the outside of the protein.

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