Sandbox Reserved 785
From Proteopedia
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<Structure load='3TL2' size='500' frame='true' align='right' caption='Malate Dehydrogenase' scene='Insert optional scene name here' /> | <Structure load='3TL2' size='500' frame='true' align='right' caption='Malate Dehydrogenase' scene='Insert optional scene name here' /> | ||
<scene name='56/563197/Unedited/1'>Malate dehydrogenase</scene> is an enzyme used in the citric acid cycle. | <scene name='56/563197/Unedited/1'>Malate dehydrogenase</scene> is an enzyme used in the citric acid cycle. | ||
| - | The <scene name='56/563197/Secondary_stucture/1'>Secondary Structure Elements</scene> of the enzyme consist of alpha helices (red) and beta sheets (orange). <scene name='56/563197/H-bonds/1'>Hydrogen Bonds</scene> in the backbone (green) show that the beta sheets (orange) are arranged in parallel in the protein since the hydrogen bonds are angled, not straight, between the sheets. When looking at malate dehydrogenase in ball and stick form the <scene name='56/563197/Hydrophobic_and_hydrophillic/1'>Hydrophobic Residues</scene> (grey) are contained primarily in the center of the polypeptide, while the hydrophilic residues (cyan) are primarily toward the outside of the molecule. | + | The <scene name='56/563197/Secondary_stucture/1'>Secondary Structure Elements</scene> of the enzyme consist of alpha helices (red) and beta sheets (orange). <scene name='56/563197/H-bonds/1'>Hydrogen Bonds</scene> in the backbone (green) show that the beta sheets (orange) are arranged in parallel in the protein since the hydrogen bonds are angled, not straight, between the sheets. When looking at malate dehydrogenase in ball and stick form the <scene name='56/563197/Hydrophobic_and_hydrophillic/1'>Hydrophobic Residues</scene> (grey) are contained primarily in the center of the polypeptide, while the hydrophilic residues (cyan) are primarily toward the outside of the molecule. Primarily the the outer portions of the polypeptide are much more accessible to <scene name='56/563197/Solvent2/1'>Solvent</scene> than the inner portions since the water molecules (blue) mostly congregate on the outside of the protein (white). |
Revision as of 19:36, 11 October 2013
| This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807. |
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is an enzyme used in the citric acid cycle. The of the enzyme consist of alpha helices (red) and beta sheets (orange). in the backbone (green) show that the beta sheets (orange) are arranged in parallel in the protein since the hydrogen bonds are angled, not straight, between the sheets. When looking at malate dehydrogenase in ball and stick form the (grey) are contained primarily in the center of the polypeptide, while the hydrophilic residues (cyan) are primarily toward the outside of the molecule. Primarily the the outer portions of the polypeptide are much more accessible to than the inner portions since the water molecules (blue) mostly congregate on the outside of the protein (white).
