Sandbox Reserved 783
From Proteopedia
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This image depicts the <scene name='56/563195/Fumarase-helicies_and_sheets/1'>secondary structure</scene> of fumarase. Alpha helicies are represented in coral color, and beta sheets are yellow. Alpha helicies make up most of the structure of fumarase. There are also random chains colored blue and green within this depiction of its secondary structure. The ligand is represented by red and gray molecules at the end of the alpha helicies. | This image depicts the <scene name='56/563195/Fumarase-helicies_and_sheets/1'>secondary structure</scene> of fumarase. Alpha helicies are represented in coral color, and beta sheets are yellow. Alpha helicies make up most of the structure of fumarase. There are also random chains colored blue and green within this depiction of its secondary structure. The ligand is represented by red and gray molecules at the end of the alpha helicies. | ||
| - | Some of the <scene name='56/563195/Fumarase-hydrophobic3/1'>hydrophobic</scene> portions of fumarase (gray) and <scene name='56/563195/Fumarase-hydrophobicphilic2/1'>hydrophillic</scene> portions (red) illustrate the complex interactions between residues. It can also be observed that many hydrophobic portions are present | + | Some of the <scene name='56/563195/Fumarase-hydrophobic3/1'>hydrophobic</scene> portions of fumarase (gray) and <scene name='56/563195/Fumarase-hydrophobicphilic2/1'>hydrophillic</scene> portions (red) illustrate the complex interactions between residues. It can also be observed that many hydrophobic portions are present within the tertiary structure of coiled coils. |
| - | <scene name='56/563195/Fumarasewater/2'>Solvent accessibility</scene> is shown through the blue spheres representing water and | + | <scene name='56/563195/Fumarasewater/2'>Solvent accessibility</scene> is shown through the blue spheres representing water molecules (the solvent) and fumarase (white). As can be seen, the center of the coiled coil is inaccessible to solvent, as is certain portions of the motif near the catalitic residues. |
<scene name='56/563195/Fumarasesubstrate/1'>Ligand</scene> | <scene name='56/563195/Fumarasesubstrate/1'>Ligand</scene> | ||
Revision as of 04:55, 18 October 2013
| This Sandbox is Reserved from Oct 10, 2013, through May 20, 2014 for use in the course "CHEM 410 Biochemistry 1 and 2" taught by Hanna Tims at the Messiah College. This reservation includes Sandbox Reserved 780 through Sandbox Reserved 807. |
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Fumarase
This image depicts the of fumarase. Alpha helicies are represented in coral color, and beta sheets are yellow. Alpha helicies make up most of the structure of fumarase. There are also random chains colored blue and green within this depiction of its secondary structure. The ligand is represented by red and gray molecules at the end of the alpha helicies.
Some of the portions of fumarase (gray) and portions (red) illustrate the complex interactions between residues. It can also be observed that many hydrophobic portions are present within the tertiary structure of coiled coils. is shown through the blue spheres representing water molecules (the solvent) and fumarase (white). As can be seen, the center of the coiled coil is inaccessible to solvent, as is certain portions of the motif near the catalitic residues.
