Ribosomal protein L23
From Proteopedia
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===L23 in 50S subunit+RNA=== | ===L23 in 50S subunit+RNA=== | ||
| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL23 in 50S subunit+RNA fragments <br /> | + | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]], [[4byc]], [[4bye]] – TtRPL23 in 50S subunit+RNA fragments <br /> |
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA<br /> | + | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]],[[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA<br /> |
[[3fin]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | [[3fin]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> | ||
[[2wwq]] – EcRPL23 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> | [[2wwq]] – EcRPL23 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br /> | ||
| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny ]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA<br /> | + | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3j4x]], [[3j50]], [[3j51]], [[3j52]], [[3j54]], [[3j56]], [[3j58]], [[3j5a]], [[3j5c]], [[3j5e]], [[3j5g]], [[3j5i]], [[3j5k]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]], [[3uos]], [[3sgf]], [[3r8s]], [[3r8t]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA<br /> |
| - | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM | + | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br /> |
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[[3bbo]] - RPL23 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | [[3bbo]] - RPL23 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br /> | ||
[[2zjq]], [[2zjr]], [[1nkw]] - DrRPL23 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL23 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br /> | ||
[[1kqs]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | [[1kqs]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br /> | ||
| - | [[1jj2]], [[1ffk]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA | + | [[1jj2]], [[1ffk]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA<br /> |
| + | [[3j3w]], [[3j3v]] – RPL23 in 50S subunit+ 23S RRNA – ''Bacillus subtilis'' – Cryo EM<br /> | ||
===L23 in 50S subunit + antibiotics=== | ===L23 in 50S subunit + antibiotics=== | ||
| - | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL23 in 50S subunit+5S RRNA+23S RRNA+ | + | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
| - | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+ | + | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]], [[4gar]], [[4gau]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
| - | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA+ | + | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]], [[4l6l]], [[4l6j]] - TtRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
| - | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cxc]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+ | + | [[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3cxc]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+antibiotics<br /> |
[[1m90]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | [[1m90]] - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin | ||
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[[2vhm]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> | [[2vhm]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br /> | ||
[[2j28]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br /> | [[2j28]] - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br /> | ||
| + | [[3j01]], [[3kcr]] – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase<br /> | ||
[[2vrh]] – EcRPL23 + RPL24 + RPL29 + trigger factor<br /> | [[2vrh]] – EcRPL23 + RPL24 + RPL29 + trigger factor<br /> | ||
[[2d3o]] - EcRPL23 + RPL24 + RPL29 + 23S RRNA + trigger factor<br /> | [[2d3o]] - EcRPL23 + RPL24 + RPL29 + 23S RRNA + trigger factor<br /> | ||
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[[1s1i]] - yRPL23 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<br /> | [[1s1i]] - yRPL23 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<br /> | ||
[[3jyw]] – RPL23 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus''<br /> | [[3jyw]] – RPL23 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus''<br /> | ||
| - | [[3izr]] – wRPL23 in the 60S subunit | + | [[3izr]] – wRPL23 in the 60S subunit <br /> |
| + | [[4a17]], [[4a1e]], [[4a1a]], [[4a1c]] - RPL23 in 60S subunit+ 26S RRNA + EIF-6 – ''Tetrahymena thermophila''<br /> | ||
| + | [[3j39]] - RPL23 in 60S subunit+ P0 – ''Drosophila melanogaster'' – Cryo EM<br /> | ||
| + | [[3j3b] - RPL23 in 60S subunit+ P0 – human – Cryo EM<br /> | ||
===L23 in large + small ribosomal subunit=== | ===L23 in large + small ribosomal subunit=== | ||
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[[2ww9]], [[2wwa]] – yRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL34+RPL35+RPL39+25S RRNA+SSH1P+SSS1+SEB2 – Cryo EM<br /> | [[2ww9]], [[2wwa]] – yRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL34+RPL35+RPL39+25S RRNA+SSH1P+SSS1+SEB2 – Cryo EM<br /> | ||
| - | [[2wwb]] - wRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL35+RPL39+25S RRNA+5.8S RRNA+ dSEBC61 – Cryo EM | + | [[2wwb]] - wRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL35+RPL39+25S RRNA+5.8S RRNA+ dSEBC61 – Cryo EM<br /> |
| + | [[2j37]] - wRPL23+RPL35+RPL31 + signal recognition particle + SRP RNA Cryo EM<br /> | ||
| + | |||
| + | ===L23 in part of 60S ribosome=== | ||
| + | |||
| + | [[3j46]], [[3j45]] - EcRPL23+RPL1+RPL24+RPL29+23S RRNA+ SECE + SECG + SECY + NC100 + A-tRNA + P-tRNA – Cryo EM<br /> | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:24, 13 November 2013
Ribosomal protein L23 (RPL23) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. RPL23 binds to 23S or 26S RRNA.
3D Structures of Ribosomal protein L23
Updated on 13-November-2013
RPL23
1n88 – TtRPL23 – NMR - Thermus thermophilus
L23 in 50S subunit+RNA
2xg0, 2xg2, 3kir, 3kit, 3kiw, 3kiy, 4byc, 4bye – TtRPL23 in 50S subunit+RNA fragments
2x9s, 2x9u, 3kni, 3knk, 3knm, 3kno, 2wrj, 2wrl, 2wro, 2wrr, 3hux, 3huz, 2wh2, 2wh4, 2wdi, 2wdj, 2wdl, 2wdn, 1vsp, 2v47 , 2v49, 1vsa, 2hgj, 2hgq, 2hgu, 2j01, 2j03, 1yl3, 3mrz, 3ms1, 3i8f, 3i8i, 3i9c, 3i9e, 3f1f, 3f1h, 3d5b, 3d5d, 2b66, 2b9n, 2b9p, 1giy, 2y0v, 2y0x, 2y0z, 2y11, 2y13, 2y15, 2y17, 2y19, 3pyo, 3pyr, 3pyt, 3pyv, 2xtg, 2xux, 2xqe,4btd, 4kfi, 4kfl, 4kbu, 4kbw, 4kcz, 4kd2, 4kd9, 4kdb, 4kdh, 4kdk, 4k0m, 4k0q, 4jux, 4ejb, 4ejc, 3v6x, 3v6w, 4b8g, 4b8i, 3zn9, 3zne, 4g5l, 4g5n, 4g5u, 4g5w, 3v23, 3v25, 3v27, 3v29, 3v2d, 3v2f, 4dha, 4dhc, 4abs, 3uz1, 3uz2, 3uz8, 3uz9, 3uzf, 3uzh, 3uzk, 3uzn, 3uye, 3uyg, 3tve, 3tvh, 3uxq, 3uxr, 3zvp - TtRPL23 in 50S subunit+5S RRNA+23S RRNA
3fin - TtRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
2wwq – EcRPL23 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – Escherichia coli
3i1n, 3i1p, 3i1r, 3i1t, 3i20, 3i22, 3e1b, 3e1d, 3df2, 3df4, 2vhn, 2qov, 2qox, 2i2t, 2i2v, 1vs6, 1vs8, 2aw4, 2awb, 3oas, 3oat, 3ofd, 3og0, 3ofq, 1vt2, 1vor, 1vou, 1vow, 1voy, 1vp0, 1pnu, 1pny, 3j4x, 3j50, 3j51, 3j52, 3j54, 3j56, 3j58, 3j5a, 3j5c, 3j5e, 3j5g, 3j5i, 3j5k, 4kix, 4kiz, 4kj1, 4kj3, 4kj5, 4kj7, 4kj9, 4kjb, 3uos, 3sgf, 3r8s, 3r8t - EcRPL23 in 50S subunit+5S RRNA+23S RRNA
3fik, 2gya, 2gyc, 3bbx, 1p85, 1p86, 3j37, 3j19, 3j0t, 3j0w, 3j0y, 3j11, 3j12, 3j14, 3izu, 3izt - EcRPL23 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM
3bbo - RPL23 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach
2zjq, 2zjr, 1nkw - DrRPL23 in 50S subunit+5S RRNA+23S RRNA – Deinococcus radiodurans
1kqs - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+CCA - Haloarcula marismortui
1jj2, 1ffk - HmRPL23P in 50S subunit+5S RRNA+23S RRNA
3j3w, 3j3v – RPL23 in 50S subunit+ 23S RRNA – Bacillus subtilis – Cryo EM
L23 in 50S subunit + antibiotics
3dll, 2zjp, 3cf5, 1xbp, 1sm1, 1nwx, 1nwy, 3pio, 3pip, 4io9, 4ioa, 4ioc - DrRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics
2qam, 2qao, 2qba, 2qbc, 2qoz, 2qp1, 3ofc, 3ofz, 3ofr, 3orb, 4gar, 4gau - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics
3oh5, 3oh7, 3ohj, 3ohk, 3ohz, 3oi1, 3oi3, 3oi5, 4l6l, 4l6j - TtRPL23 in 50S subunit+5S RRNA+23S RRNA+antibiotics
1k73, 1kc8, 1k8a, 1k9m, 1kd1, 1m1k, 3cxc - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+antibiotics
1m90 - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin
L23 in 50S subunit + ribosome releasing factor (RRF)
2qbe, 2qbg, 2qbi, 2qbk, 2z4l, 2z4n - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+RRF
2rdo - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM
L23 in large subunit + various proteins
2vhm - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix
2j28 - EcRPL23 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM
3j01, 3kcr – EcRPL22 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase
2vrh – EcRPL23 + RPL24 + RPL29 + trigger factor
2d3o - EcRPL23 + RPL24 + RPL29 + 23S RRNA + trigger factor
2aar - DrRPL23 + RPL29 + 23S RRNA + trigger factor
1w2b - HmRPL23P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
2x7n – yRPL23 + RPL24 + sarcin-ricin loop + translation initation factor 6 – yeast
2j37, 2go5 – wRPL23 + RPL31 + RPL35 + RNA + signal recognition particle – wheat- EM
L23 in the 60S subunit
3o5h, 3o58 - yRPL23 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA
1s1i - yRPL23 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM
3jyw – RPL23 in 60S subunit – Cryo EM – Thermomyces lanuginosus
3izr – wRPL23 in the 60S subunit
4a17, 4a1e, 4a1a, 4a1c - RPL23 in 60S subunit+ 26S RRNA + EIF-6 – Tetrahymena thermophila
3j39 - RPL23 in 60S subunit+ P0 – Drosophila melanogaster – Cryo EM
[[3j3b] - RPL23 in 60S subunit+ P0 – human – Cryo EM
L23 in large + small ribosomal subunit
1ml5 - EcRPL23 in 50S ribosomal subunit+30S ribosomal
subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA
fragment+23S RRNA+5S RRNA+16S RRNA – EM
L23 in the 80S ribosome
2zkr – dRPL23 in 80S ribosome – dog – Cryo EM
L23 in part of 80S ribosome
2ww9, 2wwa – yRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL34+RPL35+RPL39+25S RRNA+SSH1P+SSS1+SEB2 – Cryo EM
2wwb - wRPL23+RPL4+RPL17+RPL19+RPL25+RPL26+RPL31+RPL35+RPL39+25S RRNA+5.8S RRNA+ dSEBC61 – Cryo EM
2j37 - wRPL23+RPL35+RPL31 + signal recognition particle + SRP RNA Cryo EM
L23 in part of 60S ribosome
3j46, 3j45 - EcRPL23+RPL1+RPL24+RPL29+23S RRNA+ SECE + SECG + SECY + NC100 + A-tRNA + P-tRNA – Cryo EM
