This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4gyl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
{{STRUCTURE_4gyl| PDB=4gyl | SCENE= }}
{{STRUCTURE_4gyl| PDB=4gyl | SCENE= }}
===The E142L mutant of the amidase from Geobacillus pallidus showing the result of Michael addition of acrylamide at the active site cysteine===
===The E142L mutant of the amidase from Geobacillus pallidus showing the result of Michael addition of acrylamide at the active site cysteine===
 +
{{ABSTRACT_PUBMED_23946488}}
==Function==
==Function==
Line 6: Line 7:
==About this Structure==
==About this Structure==
-
[[4gyl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp. Bacillus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GYL OCA].
+
[[4gyl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacsp Bacsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GYL OCA].
==Reference==
==Reference==
-
<references group="xtra"/><references/>
+
<ref group="xtra">PMID:023946488</ref><references group="xtra"/><references/>
[[Category: Amidase]]
[[Category: Amidase]]
-
[[Category: Bacillus sp.]]
+
[[Category: Bacsp]]
[[Category: Cowan, D A.]]
[[Category: Cowan, D A.]]
[[Category: Hunter, R.]]
[[Category: Hunter, R.]]

Revision as of 08:26, 5 February 2014

Template:STRUCTURE 4gyl

Contents

The E142L mutant of the amidase from Geobacillus pallidus showing the result of Michael addition of acrylamide at the active site cysteine

Template:ABSTRACT PUBMED 23946488

Function

[AMIE_BACSP] Catalyzes the hydrolysis of short-chain aliphatic amides to their corresponding organic acids with release of ammonia.[1] Also exhibits in vitro acyl transferase activity, transferring the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates (By similarity).[2]

About this Structure

4gyl is a 1 chain structure with sequence from Bacsp. Full crystallographic information is available from OCA.

Reference

  • Weber BW, Kimani SW, Varsani A, Cowan DA, Hunter R, Venter GA, Gumbart JC, Sewell BT. The mechanism of the amidases: mutating the glutamate adjacent to the catalytic triad inactivates the enzyme due to substrate mispositioning. J Biol Chem. 2013 Oct 4;288(40):28514-23. doi: 10.1074/jbc.M113.503284. Epub 2013, Aug 14. PMID:23946488 doi:http://dx.doi.org/10.1074/jbc.M113.503284
  1. Kim S, Oriel P. Cloning and expression of the nitrile hydratase and amidase genes from Bacillus sp. BR449 into Escherichia coli. Enzyme Microb Technol. 2000 Oct 1;27(7):492-501. PMID:10978771
  2. Kim S, Oriel P. Cloning and expression of the nitrile hydratase and amidase genes from Bacillus sp. BR449 into Escherichia coli. Enzyme Microb Technol. 2000 Oct 1;27(7):492-501. PMID:10978771

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools