This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3u2b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:3u2b.jpg|left|200px]]
 
- 
-
<!--
 
-
The line below this paragraph, containing "STRUCTURE_3u2b", creates the "Structure Box" on the page.
 
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
 
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
 
-
or leave the SCENE parameter empty for the default display.
 
-
-->
 
{{STRUCTURE_3u2b| PDB=3u2b | SCENE= }}
{{STRUCTURE_3u2b| PDB=3u2b | SCENE= }}
- 
===Structure of the Sox4 HMG domain bound to DNA===
===Structure of the Sox4 HMG domain bound to DNA===
 +
{{ABSTRACT_PUBMED_22181698}}
-
 
+
==Function==
-
<!--
+
[[http://www.uniprot.org/uniprot/SOX4_MOUSE SOX4_MOUSE]] Transcriptional activator that binds with high affinity to the T-cell enhancer motif 5'-AACAAAG-3' motif.
-
The line below this paragraph, {{ABSTRACT_PUBMED_22181698}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 22181698 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_22181698}}
+
==About this Structure==
==About this Structure==
-
[[3u2b]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U2B OCA].
+
[[3u2b]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U2B OCA].
==Reference==
==Reference==
-
<ref group="xtra">PMID:022181698</ref><references group="xtra"/>
+
<ref group="xtra">PMID:022181698</ref><references group="xtra"/><references/>
-
[[Category: Mus musculus]]
+
[[Category: Lk3 transgenic mice]]
[[Category: Jauch, R.]]
[[Category: Jauch, R.]]
[[Category: Kolatkar, P R.]]
[[Category: Kolatkar, P R.]]

Revision as of 14:17, 12 March 2014

Template:STRUCTURE 3u2b

Contents

Structure of the Sox4 HMG domain bound to DNA

Template:ABSTRACT PUBMED 22181698

Function

[SOX4_MOUSE] Transcriptional activator that binds with high affinity to the T-cell enhancer motif 5'-AACAAAG-3' motif.

About this Structure

3u2b is a 3 chain structure with sequence from Lk3 transgenic mice. Full crystallographic information is available from OCA.

Reference

  • Jauch R, Ng CK, Narasimhan K, Kolatkar PR. Crystal structure of the Sox4 HMG/DNA complex suggests a mechanism for the positional interdependence in DNA recognition. Biochem J. 2011 Dec 19. PMID:22181698 doi:10.1042/BJ20111768

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools