User:Daud Akhtar/Sandbox 1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 22: Line 22:
===Substrate(Glucose-6-Phosphate) Binding Domain===
===Substrate(Glucose-6-Phosphate) Binding Domain===
-
The second domain consists of both α-helices and β-sheets and nine distinct anti-parallel β-sheets. The active site in this domain corresponds to the site for substrate (G6P) and is characterized by the highly conserved amino acid residues RIDHYLGK (amino acids 198-205). In regards to the overall dimer stability, Au (2000) illustrated that the second domain plays a role in dimerization. Specifically, within each subunit a NADP+ is buried in a structural moiety between the β-sheet and the C-terminus of the first domain. In this structural moiety, NADP+ does not act as a coenzyme but rather as a stabilizer. Specifically, the adenine and nicotinamide form hydrophobic interactions with Tyr503 and Arg487, and Trp509 and Tyr 401. The amide portion of the NADP+ interacts with Asp421 and ARg393 and the bisphosphate interacts with Arg370 through Hydrogen bonding. The two monomers are linked together with the amino acids Lys275 and Lys290 of one monomer forming salt bridges with Glu347 and Glu287.
+
The second domain is the<scene name='58/580852/G6p_binding_site/1'> substrate(G6P) binding domain</scene> consists of both α-helices and β-sheets and nine distinct anti-parallel β-sheets. The active site in this domain corresponds to the site for substrate (G6P) and is characterized by the highly conserved amino acid residues RIDHYLGK (amino acids 198-205). In regards to the overall dimer stability, Au (2000) illustrated that the second domain plays a role in dimerization. Specifically, within each subunit a NADP+ is buried in a structural moiety between the β-sheet and the C-terminus of the first domain. In this structural moiety, NADP+ does not act as a coenzyme but rather as a stabilizer. Specifically, the adenine and nicotinamide form hydrophobic interactions with Tyr503 and Arg487, and Trp509 and Tyr 401. The amide portion of the NADP+ interacts with Asp421 and ARg393 and the bisphosphate interacts with Arg370 through Hydrogen bonding. The two monomers are linked together with the amino acids Lys275 and Lys290 of one monomer forming salt bridges with Glu347 and Glu287.
===Substrate Binding and Catalytic Mechanism===
===Substrate Binding and Catalytic Mechanism===

Revision as of 01:02, 30 March 2014

Glucose-6-Phosphate Dehydrogenase(G6PD)

Glucose 6 Phosphate Dehydrogenase(1QKI) Structure

Drag the structure with the mouse to rotate

Glucose 6 Phosphate Dehydrognease

jghgjgjhgjhg


References

  1. Salati LM, Amir-Ahmady B. Dietary regulation of expression of glucose-6-phosphate dehydrogenase. Annu Rev Nutr. 2001;21:121-40. PMID:11375432 doi:http://dx.doi.org/10.1146/annurev.nutr.21.1.121
  2. Salati LM, Amir-Ahmady B. Dietary regulation of expression of glucose-6-phosphate dehydrogenase. Annu Rev Nutr. 2001;21:121-40. PMID:11375432 doi:http://dx.doi.org/10.1146/annurev.nutr.21.1.121
  3. . Glucose-6-phosphate dehydrogenase deficiency. WHO Working Group. Bull World Health Organ. 1989;67(6):601-11. PMID:2633878
  4. Au SW, Gover S, Lam VM, Adams MJ. Human glucose-6-phosphate dehydrogenase: the crystal structure reveals a structural NADP(+) molecule and provides insights into enzyme deficiency. Structure. 2000 Mar 15;8(3):293-303. PMID:10745013
  5. Manganelli G, Masullo U, Passarelli S, Filosa S. Glucose-6-phosphate dehydrogenase deficiency: disadvantages and possible benefits. Cardiovasc Hematol Disord Drug Targets. 2013 Mar 1;13(1):73-82. PMID:23534950
  6. Beutler E. Glucose-6-phosphate dehydrogenase deficiency. N Engl J Med. 1991 Jan 17;324(3):169-74. PMID:1984194 doi:http://dx.doi.org/10.1056/NEJM199101173240306

Proteopedia Page Contributors and Editors (what is this?)

Daud Akhtar

Personal tools