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== Catalytic triad ==
== Catalytic triad ==
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MGL has a classic <scene name='58/580298/Catalytic_triad/1'>catalytic triad</scene> that contains Ser-His-Asp. The triad was found using site-directed mutagenesis of each individual residue and each of these amino acid residues are catalytically essential to MGL <ref name="Bertrand" />. The catalytic triad is located in the [[:Category:Ligand binding pocket| Binding Pocket]]buried at the bottom of it in the oxyanion hole connected by a water molecule.'''Figure 4'''
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MGL has a classic <scene name='58/580298/Catalytic_triad/1'>catalytic triad</scene> that contains Ser-His-Asp. The triad was found using site-directed mutagenesis of each individual residue and each of these amino acid residues are catalytically essential to MGL <ref name="Bertrand" />. The catalytic triad is located in the [[:Category:Ligand binding pocket| Binding Pocket]] buried at the bottom of it in the oxyanion hole connected by a water molecule.'''Figure 4'''
[[Image:Catalytic_triad_binding_pocket.png|300px|thumb|'''Figure 4:''' The binding pocket of MGL with the catalytic triad (shown in red) buried in it.]]
[[Image:Catalytic_triad_binding_pocket.png|300px|thumb|'''Figure 4:''' The binding pocket of MGL with the catalytic triad (shown in red) buried in it.]]
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===Overall Reaction===
===Overall Reaction===
[[Image:Reaction.PNG|350px|thumb|'''Figure 5:''' The breakdown of 2-AG into arachidonic acid +glyverol by MGL.]]
[[Image:Reaction.PNG|350px|thumb|'''Figure 5:''' The breakdown of 2-AG into arachidonic acid +glyverol by MGL.]]
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In this reaction 2-AG binds to the catalytic triad in the oxyanion hole in the active site. In the [[:Category:Oxyanion hole| oxyanion holes]] the substrate is stabilized by two nitrogen atoms from the catalytic Hisdidine and Asperatate during the transition step of the catalytic reaction. The catalytuc triad activates the nucleophilic serine and cleaves the ester bond of 2-AG that is being stabilized by its carbonyl group that is attached to the oxyanion hole. The glycerol molecule is released and it might diffuse to the narrow "exit hole", while the arachidonic acid would diffuse back to the top of the tunnel and leave the protein <ref name="Bertrand" />.
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In this reaction 2-AG binds to the catalytic triad in the oxyanion hole in the active site. In the [[:Category:Oxyanion hole| oxyanion holes]] the substrate is stabilized by two nitrogen atoms from the catalytic Histidine and Aspartate during the transition step of the catalytic reaction. The catalytic triad activates the nucleophilic serine and cleaves the ester bond of 2-AG that is being stabilized by its carbonyl group that is attached to the oxyanion hole. The glycerol molecule is released and it might diffuse to the narrow "exit hole", while the arachidonic acid would diffuse back to the top of the tunnel and leave the protein <ref name="Bertrand" />.
==Ligand Binding Site==
==Ligand Binding Site==

Revision as of 01:38, 15 April 2014

Monoglyceride Lipase (MGL)

Secondary structure of MGL

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