Ribosomal protein L4

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[[1dmg]] – RPL4 – ''Thermotoga maritima''
[[1dmg]] – RPL4 – ''Thermotoga maritima''
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=== L4 in 50S subunit+RNA ===
 
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[[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]] – TtRPL4 in 50S subunit+RNA fragments – ''Thermus thermophilus''<br />
 
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[[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47]], [[2v49]], [[1vsa]], [[2hgj]], [[2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[3tve]], [[3tvh]], [[3uye]], [[3uyg]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[4dha]], [[4dhc]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[3zvp]] - TtRPL4 in 50S subunit+5S RRNA+23S RRNA<br />
 
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[[3fin]] - TtRPL4 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
 
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[[2wwq]] – EcRPL4 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />
 
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[[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3ofd]], [[3og0]], [[1vor]] [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[3r8s]], [[3r8t]] [[3uos]], [[3uxq]], [[3uxr]], [[3sgf]], [[3uos]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA<br />
 
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[[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3izt]], [[3izu]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3j19]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<br />
 
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[[3kcr]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />
 
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[[3j01]] – EcRPL4 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase – Cryo-EM<br />
 
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[[2rdo]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<br />
 
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[[3bbo]] – RPL4 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br />
 
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[[3iy9]] – RPL4 in 50S subunit – ''Leishmania taretolae''<br />
 
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[[2zjq]], [[2zjr]], [[1nkw]] - DrRPL4 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br />
 
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[[1kqs]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA+CCA - ''Haloarcula marismortui''<br />
 
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[[1jj2]], [[1ffk]], [[3cc2]], [[2qa4]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA<br />
 
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[[3cc7]], [[3cce]], [[3ccj]], [[3ccl]], [[3ccm]], [[3ccq]], [[3ccr]], [[3ccs]], [[3ccu]], [[3ccv]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA (mutant)<br />
 
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[[3j21]] – RPL4 in 50S subunit – ''Pyrococcus furiosus''
 
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=== L4 in 50S subunit + antibiotics ===
 
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[[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]] - DrRPL4 in 50S subunit+5S RRNA+23S RRNA+antibiotic <br />
 
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[[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]] – TtRPL4 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
 
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[[2qam]], [[2qao]], [[2qoz]], [[2qp1]], [[2qba]], [[2qbc]], [[3ofc]], [[3ofz]], [[3ofq]], [[3ofr]], [[1vt2]], [[3orb]], [[3oas]], [[3oat]], [[4gar]], [[4gau]]- EcRPL4 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />
 
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[[1k73]], [[1kc8]], [[1k8a]], [[1k9m]], [[1kd1]], [[1m1k]], [[3i55]], [[3i56]], [[3g4s]], [[3g6e]], [[3g71]], [[2qex]], [[3cpw]],[[3cc4]], [[3cd6]], [[2otj]], [[2otl]], [[3cxc]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA+antibiotic - ''Halobacterium marismortui''<br />
 
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[[1m90]], [[3cma]], [[3cme]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA+ sparsomycin+CCA-Phe-caproic acid-biotin<br />
 
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[[1jzx]], [[1jzy]], [[1jzz]], [[1j5a]], [[1k01]] - DrRPL4+RPL22+RPL42+23S RRNA+antibiotic<br />
 
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=== L4 in 60S subunit ===
 
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[[3jyw]] - RPL4 in 60S subunit – ''Thermomyces lanuginosus'' – Cryo-EM<br />
 
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[[2ftc]] - RPL4 in 60S subunit+16S RRNA - bovine<br />
 
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[[1s1i]] - yRPL4 in 40S ribosomal subunit+18S RRNA+elongation factor 2 – Cryo-EM – yeast<br />
 
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[[3izs]] – yRPL4 in 60S ribosomal subunit – Cryo-EM<br />
 
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[[3u5e]], [[3u5i]] – yRPL4 in 60S ribosomal subunit<br />
 
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[[3o58]], [[3o5h]] – yRPL4 in 60S subunit+25S RRNA+5SRRNA+5.8RRNA<br />
 
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[[2ww9]], [[2wwa]], [[2wwb]] – yRPL4+RPL17+RPL19+RPL15+RPL25+RPL26+RPL41+RPL45+RPL49+25S RRNA+SSH1P+SSS1+SEB2<br />
 
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[[4a1a]], [[4a1c]], [[4a1e]] – RPL4 in 60S subunit+5SRRNA+5.8RRNA – ''Tetrahymna thermophila''
 
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=== L4 in large + small ribosomal subunit ===
 
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[[1ml5]] - EcRPL4 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM<br />
 
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[[2zkr]] - RPL4 in 60S ribosomal subunit+30S ribosomal subunit+28S RRNA+5.8S RRNA – Cryo-EM - dog
 
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=== L4 in 50S subunit + ribosome releasing factor (RRF) ===
 
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[[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA+RRF
 
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=== L4 in 50S subunit + various proteins ===
 
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[[2vhm]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />
 
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[[2j28]] - EcRPL4 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<br />
 
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[[1w2b]] - HmRPL4P in 50S subunit+5S RRNA+23S RRNA+trigger factor N-terminal
 
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===L4 in 60S subunit + various proteins===
 
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[[4b6a]] – yRPL4 in 60S subunit +25S RRNA+5SRRNA + P0 + P1 + P2 + ARX1
 
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 06:41, 24 April 2014

Image:RPL4.png
Crystal Structure of Ribosomal protein L4 from Thermus thermophilus (2xg0, chain F)

Template:STRUCTURE 2xg0

















Ribosomal protein L4 (RPL4 ) is one of the 34 proteins which belong to the of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It may actively participate in the catalysis of peptide bond formation. In the archaea like in Haloarcula marismortui the L4 is called L4P (RPL4P). The images at the left and at the right correspond to one representative RPL4, i.e. the crystal structure of Ribosomal protein L4 from Thermus thermophilus (2xg0, chain F).

Contents

3D Structures of Ribosomal protein L4

Updated on 24/4/2014

RPL4

1dmg – RPL4 – Thermotoga maritima

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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