Ribosomal protein L16
From Proteopedia
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[[1wki]] – TtRPL16 – ''Thermus thermophilus'' - NMR<BR />  | [[1wki]] – TtRPL16 – ''Thermus thermophilus'' - NMR<BR />  | ||
| - | ===L16 in 50S subunit+RNA===  | ||
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| - | [[2xg0]], [[2xg2]], [[3kir]], [[3kit]], [[3kiw]], [[3kiy]], [[4byc]], [[4bye]] – TtRPL16 in 50S subunit+RNA fragments<br />   | ||
| - | [[2x9s]], [[2x9u]], [[3kni]], [[3knk]], [[3knm]], [[3kno]], [[2wrj]], [[2wrl]], [[2wro]], [[2wrr]], [[3hux]], [[3huz]], [[2wh2]], [[2wh4]], [[2wdi]], [[2wdj]], [[2wdl]], [[2wdn]], [[1vsp]], [[2v47 ]], [[2v49]], [[1vsa]], [[2hgj]], [[ 2hgq]], [[2hgu]], [[2j01]], [[2j03]], [[1yl3]], [[3mrz]], [[3ms1]], [[3i8f]], [[3i8i]], [[3i9c]], [[3i9e]], [[3f1f]], [[3f1h]], [[3d5b]], [[3d5d]], [[2b66]], [[2b9n]], [[2b9p]], [[1giy]], [[2y0v]], [[2y0x]], [[2y0z]], [[2y11]], [[2y13]], [[2y15]], [[2y17]], [[2y19]], [[3pyo]], [[3pyr]], [[3pyt]], [[3pyv]], [[2xtg]], [[2xux]], [[2xqe]], [[4btd]], [[4kfi]], [[4kfl]], [[4kbu]], [[4kbw]], [[4kcz]], [[4kd2]], [[4kd9]], [[4kdb]], [[4kdh]], [[4kdk]], [[4k0m]], [[4k0q]], [[4jux]], [[4ejb]], [[4ejc]], [[3v6x]], [[3v6w]], [[4b8g]], [[4b8i]], [[3zn9]], [[3zne]], [[4g5l]], [[4g5n]], [[4g5u]], [[4g5w]], [[3v23]], [[3v25]], [[3v27]], [[3v29]], [[3v2d]], [[3v2f]], [[4dha]], [[4dhc]], [[4abs]], [[3uz1]], [[3uz2]], [[3uz8]], [[3uz9]], [[3uzf]], [[3uzh]], [[3uzk]], [[3uzn]], [[3uye]], [[3uyg]], [[3tve]], [[3tvh]], [[3uxq]], [[3uxr]], [[3zvp]] -  TtRPL16 in 50S subunit+5S RRNA+23S RRNA<br />  | ||
| - | [[3fin]] - TtRPL16 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />  | ||
| - | [[2wwq]] – EcRPL16 in 50S subunit+5S RRNA+23S RRNA+mRNA+P-site tRNA – ''Escherichia coli''<br />  | ||
| - | [[3i1n]], [[3i1p]], [[3i1r]], [[3i1t]], [[3i20]], [[3i22]], [[3e1b]], [[3e1d]], [[3df2]], [[3df4]], [[2vhn]], [[2qov]], [[2qox]], [[2i2t]], [[2i2v]], [[1vs6]], [[1vs8]], [[2aw4]], [[2awb]], [[3oas]], [[3oat]], [[3ofd]], [[3og0]], [[3ofq]], [[1vt2]], [[1vor]], [[1vou]], [[1vow]], [[1voy]], [[1vp0]], [[1pnu]], [[1pny]], [[4kix]], [[4kiz]], [[4kj1]], [[4kj3]], [[4kj5]], [[4kj7]], [[4kj9]], [[4kjb]], [[3uos]], [[3sgf]], [[3r8s]], [[3r8t]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA<br />  | ||
| - | [[3fik]], [[2gya]], [[2gyc]], [[3bbx]], [[1p85]], [[1p86]], [[3j37]], [[3j19]], [[3j0t]], [[3j0w]], [[3j0y]], [[3j11]], [[3j12]], [[3j14]], [[3izu]], [[3izt]] -  EcRPL16 in 50S subunit+5S RRNA+23S RRNA – Cryo-EM<BR />  | ||
| - | [[3kcr]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+preprotein translocase<br />  | ||
| - | [[3bbo]] - RPL16 in 50S subunit+5S RRNA+23S RRNA+4.8S RRNA – Cryo-EM – spinach<br />  | ||
| - | [[2zjq]], [[2zjr]], [[1nkw]] - DrRPL16 in 50S subunit+5S RRNA+23S RRNA – ''Deinococcus radiodurans''<br />  | ||
| - | [[3iy9]] – RPL16  in 50S subunit – ''Leishmania taretolae''  | ||
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| - | ===L16 in 50S subunit + antibiotics===  | ||
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| - | [[3dll]], [[2zjp]], [[3cf5]], [[1xbp]], [[1sm1]], [[1nwx]], [[1nwy]], [[3pio]], [[3pip]], [[4io9]], [[4ioa]], [[4ioc]] - DrRPL16 in 50S subunit+5S RRNA+23S RRNA+general stress protein Ctc+antibiotic<br />  | ||
| - | [[2qam]], [[2qao]], [[2qba]], [[2qbc]], [[2qoz]], [[2qp1]], [[3ofc]], [[3ofz]], [[3ofr]], [[3orb]], [[4gar]], [[4gau]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />  | ||
| - | [[3oh5]], [[3oh7]], [[3ohj]], [[3ohk]], [[3ohz]], [[3oi1]], [[3oi3]], [[3oi5]], [[4l6l]], [[4l6j]] - TtRPL16 in 50S subunit+5S RRNA+23S RRNA+antibiotic<br />  | ||
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| - | ===L16 in large + small ribosomal subunit===  | ||
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| - | [[1ml5]] - EcRPL16 in 50S ribosomal subunit+30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA – EM<BR />  | ||
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| - | ===L16 in 50S subunit + ribosome releasing factor (RRF)===  | ||
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| - | [[2qbe]], [[2qbg]], [[2qbi]], [[2qbk]], [[2z4l]], [[2z4n]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+RRF<br />  | ||
| - | [[2rdo]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+EF-G+RRF – Cryo-EM<BR />  | ||
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| - | ===L16 in 50S subunit + various proteins===  | ||
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| - | [[2vhm]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+PDF C-terminal helix<br />  | ||
| - | [[2j28]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+signal recognition particle – Cryo-EM<BR />  | ||
| - | [[3j01]] - EcRPL16 in 50S subunit+5S RRNA+23S RRNA+ preprotein translocase<br />  | ||
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| - | ===L16 in the 60S subunit===  | ||
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| - | [[3o5h]], [[3o58]] - yRPL16 in 60S subunit+5S RRNA+25S RRNA+5.8S RRNA – yeast<br />  | ||
| - | [[1s1i]] - yRPL16 in 60S subunit+5S RRNA+5.8S RRNA – Cryo EM<BR />  | ||
| - | [[3u5e]], [[3u5i]] - yRPL16 in 60S subunit<br />  | ||
| - | [[4b6a]] - yRPL16 in 60S subunit + P0 + P1 + P2 + ARX1 – Cryo EM<br />  | ||
| - | [[3jyw]] – RPL16 in 60S subunit – Cryo EM – ''Thermomyces lanuginosus''<br />  | ||
| - | [[2ftc]] - RPL16 in 60S subunit+16S RRNA – Cryo EM – bovine  | ||
===L16 in part of 50S subunit===  | ===L16 in part of 50S subunit===  | ||
| - | [[1njm]], [[1njp]] – DrRPL16 + 23S RRNA + tRNA acceptor stEM mimic + general stress protein CTC + antibiotic  | + | [[1njm]], [[1njp]] – DrRPL16 + 23S RRNA + tRNA acceptor stEM mimic + general stress protein CTC + antibiotic - ''Deinococcus radiodurans''<br />  | 
[[Category:Topic Page]]  | [[Category:Topic Page]]  | ||
Revision as of 08:25, 24 April 2014
Crystal Structure of Ribosomal protein L16 1wki
Ribosomal protein L16 (RPL16) is one of the 34 proteins which belong to the large 50S subunit of the prokaryotic ribosome or to the ca. 49 proteins in the large 60S subunit of the eukaryotic ribosome. It binds to 23S RRNA and is located at the A site of the peptidyltransferase center.
3D Structures of Ribosomal protein L16
Updated on 24-April-2014
RPL16
1wki – TtRPL16 – Thermus thermophilus - NMR
L16 in part of 50S subunit
1njm, 1njp – DrRPL16 + 23S RRNA + tRNA acceptor stEM mimic + general stress protein CTC + antibiotic - Deinococcus radiodurans
