User:Abbas Raza/Sandbox 1

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[[Image:neil3 full structure.png|thumb|left|300px|mouse neil3]]
[[Image:neil3 full structure.png|thumb|left|300px|mouse neil3]]
<StructureSection load='3wOf' size='340' side='right' caption='Crystal structure representation of neil3' scene=''>
<StructureSection load='3wOf' size='340' side='right' caption='Crystal structure representation of neil3' scene=''>
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This protein is a unique member of Fpg/NEIL family of DNA glysosylases which shows preference for both oxidative purines and pyrimidine lesions. Originally identified through in-silico studies from Wallace, Mitra and Seeger group back in 2002, the crystallisation of NEIL3 remained challenge for almost a decade due to the difficulty in getting fulll length purification of the protein as it tend to aggregate until a trancated version was crystallised in 2013 and the crystal structure publlished.
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Neil3 proteins are almost twice the size of other Fpg/Nei family members. The N terminus of the Neil3 proteins is highly conserved, with a complete Fpg/Nei-like core protein that harbors an H2TH motif and a canonical zinc finger motif. Neil3 proteins also have a Ran binding protein (RanBP2)-type zinc finger motif and a duplicated GRF-zinc finger motif at their extended C terminus (Bandaru et al., 2002; Krokeide et al., 2009; Liu et al., 2010; Morland et al., 2002; Takao et al., 2009; Torisu et al., 2005)

Revision as of 00:15, 25 April 2014

Neil3: a DNA repair glycosylase from mus musculus

Crystal structure representation of neil3

Drag the structure with the mouse to rotate

References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

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Abbas Raza

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