Ribosomal protein S6

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[[1vmb]] – RPS6 – ''Thermotoga maritima''<br />
[[1vmb]] – RPS6 – ''Thermotoga maritima''<br />
[[3r3t]] – RPS6 – ''Bacillus anthracis''
[[3r3t]] – RPS6 – ''Bacillus anthracis''
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===S6 in small ribosomal subunit===
 
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[[2zm6]], [[1n36]], [[1j5e]], [[3oge]], [[3ogy]], [[3ohc]], [[3ohd]], [[3ohy]], [[3oi0]], [[3oi2]], [[3oi4]], [[3oto]] - TtRPS6 in 30S ribosomal subunit+THX+16S RRNA<br />
 
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[[2vqe]], [[2vqf]], [[2uuc]], [[2e5l]], [[2uu9]], [[2uua]], [[2uub]], [[3pyn]], [[3pyq]], [[3pys]], [[3pyu]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+RNA fragment<br />
 
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[[3kc4]] – EcRPS6 in 30S ribosomal subunit - ''Escherichia coli''<br />
 
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[[3i1m]], [[3i1o]], [[3df1]], [[3df3]], [[2vho]], [[2vhp]], [[2avy]], [[2aw7]], [[1pnx]], [[1oaq]], [[3oar]], [[3ofa]], [[3ofb]], [[2ofo]], [[3ofp]], [[3ofx]], [[3ofy]], [[3or9]], [[3ora]] - EcRPS6 in 30S ribosomal subunit+16S RRNA<br />
 
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[[1i94]], [[1fka]], [[3uxs]], [[3uxt]], [[4dr1]] - TtRPS6 in 30S ribosomal subunit+16S RRNA<br />
 
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[[4duy]], [[4duz]], [[4dv0]], [[4dv1]], [[4dv2]], [[4dv3]], [[4dv4]], [[4dv5]], [[4dv6]], [[4dv7]] - TtRPS6 in 30S ribosomal subunit+16S RRNA (mutant)<br />[[4dr4]], [[4b3m]], [[4b3r]], [[4b3s]], [[4b3t]] – TtRPS6 in 30S ribosomal subunit+16S RRNA + mRNA<br />
 
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[[1p87]], [[1p6g]] - EcRPS6 in 30S ribosomal subunit+16S RRNA – Cryo-EM<br />
 
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[[3bbn]] - RPS6 in 30S ribosomal subunit+16S RRNA – Cryo-EM – spinach
 
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===S6 in small + large ribosomal subunit===
 
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[[1ml5]] - EcRPS6 in 30S ribosomal subunit+50S ribosomal subunit+THX+chain release factor 2+P-site tRNA+tRNA Phe+mRNA fragment+23S RRNA+5S RRNA+16S RRNA - EM
 
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===S6 in small ribosomal subunit+ chain release factor (RF)===
 
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[[3mr8]], [[3ms0]] – TtRPS6 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+mRNA+16S RRNA<br />
 
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[[3d5a]], [[3d5c]] - TtRPS6 in 30S ribosomal subunit+THX+chain release factor 1+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
 
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[[3zvo]] – TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA Met +mRNA +16S RRNA+chain release factor 3<br />
 
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[[2b64]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 1<br />
 
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[[2b9m]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA+chain release factor 2<br />
 
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[[2x9r]], [[2x9t]], [[2wh1]], [[2wh3]] - TtRPS6 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+mRNA +16S RRNA<br />
 
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[[3f1e]], [[3f1g]] - TtRPS6 in 30S ribosomal subunit+THX+chain release factor 2+P-site tRNA+E-site tRNA +16S RRNA<br />
 
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[[3uoq]] - EcRPS6 + 16S RRNA + mRNA + peptide chain release factor<br />
 
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[[4kfh]], [[4kfk]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+ RF-2 + mRNA+ P-site tRNA fMet<br />
 
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===S6 in small ribosomal subunit+tRNA+mRNA===
 
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[[2hgi]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet<br />
 
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[[4l6k]], [[4l6m]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA<br />
 
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[[2hgp]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
 
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[[3t1h]], [[3t1y]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Lys +mRNA<br />
 
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[[3tvf]], [[3tvg]], [[3uyd]], [[3uyf]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA<br />
 
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[[3zn7]], [[3znd]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+A-site tRNA Ile agmatidine + E-site tRNA Ile agmatidine + mRNA<br />
 
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[[3uz6]], [[3uz7]], [[3uzg]], [[3uzi]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA<br />[[2i2p]], [[2i2u]] - EcRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Phe+mRNA<br />
 
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[[2hgr]], [[3v6u]], [[3v6v]], [[4ej9]], [[4eja]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Phe+tRNA fMet+mRNA<br />
 
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[[1yl4]] – TtRPS6 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+THRS mRNA operator<br />
 
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[[1pns]] - EcRPS6 in 30S ribosomal subunit+ tRNA Phe+16S RRNA+mRNA <br />
 
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[[3j0u]], [[3j0v]], [[3j0x]], [[3j0z]], [[3j10]] – EcRPS6 in 30S ribosomal subunit+ A-site tRNA + P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
 
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[[3j13]] – EcRPS6 in 30S ribosomal subunit+ P-site tRNA +16S RRNA+mRNA – Cryo-EM<br />
 
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[[1xnq]], [[1xnr]] - TtRPS6 in 30S ribosomal subunit+THX+mRNA+tRNA anticodon+16S RRNA<br />
 
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[[4gkj]], [[4gkk]] - TtRPS6 in 30S ribosomal subunit +16S RRNA +THX + mRNA + tRNA Met<br />
 
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[[4jv5]], [[4jya]], [[4k0k]], [[4k0l]] - TtRPS6 in 30S ribosomal subunit +16S RRNA +THX + mRNA + ASL-tRNA <br />
 
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===S6 in small ribosomal subunit+A-site tRNA===
 
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[[2uxd]] , [[2uxc]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA CGGG+tRNA anticodon+16S RRNA<br />
 
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[[1n32]], [[1n33]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA fragment+tRNA anticodon+16S RRNA<br />
 
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[[1n34]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA fragment +16S RRNA<br />
 
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[[1xmo]], [[1xmq]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA+tRNA anticodon+16S RRNA<br />
 
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[[2uxb]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA GGGU+tRNA anticodon+16S RRNA
 
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===S6 in small ribosomal subunit+P-site tRNA===
 
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[[3i8g]] - TtRPS6 in 30S ribosomal subunit+P-site tRNA+mRNA +16S RRNA<br />
 
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[[3i8h]], [[3i9b]], [[3i9d]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA<br />
 
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[[1ibk]] - TtRPS6 in 30S ribosomal subunit+THX+P-site mRNA fragment +16S RRNA<br />
 
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[[2wwl]] - EcRPS6 in 30S ribosomal subunit+Poly-Ala chain+P-site tRNA+mRNA +16S RRNA - ''Escherichia coli''<br />
 
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[[3i1q]] - EcRPS6 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA <br />
 
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[[3i1s]], [[3i1z]], [[3i21]] - EcRPS6 in 30S ribosomal subunit+P-site tRNA hairpin+mRNA +16S RNA
 
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===S6 in small ribosomal subunit+A-site tRNA+P-site tRNA===
 
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[[1ibl]], [[1ibm]] - TtRPS6 in 30S ribosomal subunit+THX+A-site mRNA fragment+P-site mRNA fragment+tRNA anticodon+16S RRNA
 
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===S6 in small ribosomal subunit+P-site tRNA+E-site tRNA===
 
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[[2ow8]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA+mRNA +16S RRNA<br />
 
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[[2b9o]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA Phe+E-site tRNA Phe+mRNA +16S RRNA<br />
 
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[[2qnh]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA<br />
 
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[[2wdg]], [[2wdh]], [[2wdk]], [[2wdm]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA+E-site tRNA+mRNA +16S RRNA+tRNA Phe
 
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===S6 in small ribosomal subunit+A-site tRNA+P-site tRNA+E-site tRNA===
 
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[[2gy9]], [[2gyb]] - EcRPS6 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA – Cryo-EM<br />
 
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[[1jgo]], [[1jgp]], [[1jgq]], [[1gix]] - TtRPS6 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+tRNA Phe+mRNA +16S RRNA<br />
 
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[[4k0p]] - TtRPS6 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA +mRNA +16S RRNA<br />
 
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[[3e1a]], [[3e1c]] - EcRPS6 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA
 
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===S6 in small ribosomal subunit + antibiotics===
 
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[[1i95]], [[1i97]], [[2hhh]], [[2f4v]], [[3knn]], [[4dr2]], [[4dr3]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+antibiotic<br />
 
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[[1hnw]], [[1hnx]], [[1hnz]], [[1fjg]], [[4aqy]], [[4dr5]], [[4dr6]], [[4dr7]], [[4khp]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+mRNA fragment+antibiotic<br />
 
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[[2qbb]], [[2qb9]], [[1vs5]], [[1vs7]], [[2qan]], [[2qal]], [[2qou]], [[2qow]], [[2qoy]], [[2qp0]], [[2z4k]], [[2z4m]], [[3oaq]], [[3ofo]] - EcRPS6 in 30S ribosomal subunit+16S RRNA+antibiotic<br />
 
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[[3sfs]] – EcRPS6 in 30S ribosomal subunit+16S RRNA+ mRNA + RF-3 + antibiotic<br />
 
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[[4gaq]], [[4gas]] – EcRPS6 in 30S ribosomal subunit+16S RRNA+ mRNA + antibiotic<br />
 
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[[2j00]], [[2j02]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+paromomycin+P-site tRNA fMet+E-site tRNA Phe+mRNA<br />
 
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[[3knl]], [[3knm]], [[3knj]], [[3knh]] - TtRPS6 in 30S ribosomal subunit+P-site tRNA+A-site tRNA+E-site tRNA+mRNA +16S RRNA+ antibiotics<br />
 
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[[3uz3]], [[3uz4]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Leu + tRNA fMet + mRNA + paromomycin<br />
 
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[[4g5k]], [[4g5m]], [[4g5t]], [[4g5v]] - TtRPS6 in 30S ribosomal subunit+16S RRNA + tRNA fMet + mRNA + antibiotics<br />
 
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[[3uzl]], [[3uzm]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+tRNA Tyr + tRNA fMet + mRNA + paromomycin
 
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===S6 in small ribosomal subunit + ribosome recycling factor===
 
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[[2qbd]], [[2qbf]] - EcRPS6 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor<br />
 
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[[3r8n]], [[3r8o]], [[4gd1]], [[4gd2]] – EcRPS6 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor + mRNA + tRNA<br />
 
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[[2qbh]], [[2qbj]] - EcRPS6 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+gentamicin<br />
 
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[[2v46]], [[2v48]] - TtRPS6 in 30S ribosomal subunit+16S RRNA+ribosome recycling factor+P-site tRNA Phe+mRNA+tRNA fMet
 
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===S6 in small ribosomal subunit + elongation factor===
 
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[[2wri]], [[2wrk]], [[2xsy]], [[2xuy]] - TtRPS6 in 30S ribosomal subunit+THX+P-site tRNA+mRNA +16S RRNA+elongation factor G<br />
 
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[[2wrn]], [[2wrq]] - TtRPS6 in 30S ribosomal subunit+THX+A-site tRNA+mRNA +16S RRNA+elongation factor TU-4<br />
 
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[[3fic]] - TtRPS6 in 30S ribosomal subunit+THX+A-site tRNA+P-site tRNA+E-site tRNA+mRNA codon+16S RRNA+elongation factor TU-A<br />
 
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[[4abr]] - TtRPS6 in 30S ribosomal subunit+THX + E/P-site tRNA fMet +mRNA codon+16S RRNA+elongation factor TU<br />
 
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[[3izv]] – EcRPS6 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+elongation factor TU<br />
 
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[[3j18]] - EcRPS6 in 30S ribosomal subunit+A/T-site tRNA Phe +16S RRNA+ mRNA + SSRA-binding protein + formyl-Met specific initiator tRNA + elongation factor G – Cryo-EM<br />
 
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[[3izw]] – EcRPS6 in 30S ribosomal subunit+A-site tRNA Phe +mRNA +16S RRNA+elongation factor TU<br />
 
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[[2y0u]], [[2y0w]], [[2y0y]], [[2y10]], [[2y12]], [[2y14]], [[2y16]], [[2y18]] - TtRPS6 in 30S subunit+THX+A-site tRNA+E-site tRNA+mRNA codon+elongation factor TU<br />
 
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[[3fih]] - EcRPS6 in 30S ribosomal subunit+A-site tRNA Phe+P-site tRNA+mRNA +16S RRNA+elongation factor TU<br />
 
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[[3huw]], [[3huy]] - TtRPS6 in 30S ribosomal subunit+THX+tRNA-Met+mRNA +16S RRNA+elongation factor P<br />
 
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[[2xqd]] – TtRPS6 in 30S ribosomal subunit+THX+E-site tRNA+mRNA +16S RRNA+elongation factor TU-B<br />
 
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[[4b8f]], [[4b8h]] - TtRPS6 in 30S ribosomal subunit+THX+RNA+mRNA +16S RRNA+elongation factor G<br />
 
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[[4btc]], [[4kdg]], [[4kdj]] - TtRPS6 in 30S ribosomal subunit+THX+RNA +16S RRNA+elongation factor G<br />
 
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[[4juw]] - TtRPS6 in 30S ribosomal subunit+THX+ tRNA Phe +16S RRNA + mRNA +elongation factor G<br />
 
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[[4kbt]], [[4kbv]], [[4kcy]], [[4kd0]], [[4kd8]], [[4kda]] - TtRPS6 in 30S ribosomal subunit+THX+ tRNA Met +16S RRNA + mRNA + viomycin + elongation factor G<br />
 
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[[4kiy]], [[4kj0]], [[4kj2]], [[4kj4]], [[4kj6]], [[4kj8]], [[4kja]], [[4kjc]] - EcRPS6 in 30S ribosomal subunit +16S RRNA + viomycin + elongation factor G<br />
 
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===S6 in small ribosomal subunit + translation initiation factor===
 
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[[1i96]] - TtRPS6 in 30S ribosomal subunit+THX+IF3+16S RRNA<br />
 
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[[1hr0]] - TtRPS6 in 30S ribosomal subunit+THX+IF+16S RRNA
 
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===S6 in small ribosomal subunit + various proteins===
 
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[[3kiq]], [[3kis]], [[3kiu]], [[3kix]] - TtRPS6 in 30S ribosomal subunit+toxin RelE+16S RRNA<br />
 
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[[1voq]], [[1vos]] , [[1vov]], [[1vox]], [[1voz]] - EcRPS6 in 30S ribosomal subunit+protein Y+16S RRNA<br />
 
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[[3j36]] - EcRPS6 in 30S ribosomal subunit+ tetracycline resistance protein +16S RRNA + mRNA + P-tRNA – Cryo-EM<br />
 
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[[3iy8]] – EcRPS6+EcRPS5+EcRPS8+EcRPS9+EcRPS11+EcRPS12+EcRPS15+EcRPS16+EcRPS17+EcRPS18+''Leishmania taretolae'' small subunit<br />
 
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[[2xfz]], [[2xg1]] – TtRPS6 in 30S ribosomal subunit+colicin E3+E-site tRNA+mRNA+16S RRNA<br />
 
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[[4dh9]], [[4dhb]] - TtRPS6 in 30S ribosomal subunit +16S RRNA+mRNA+P-site tRNA fMet +THX + YAEJ<br />
 
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[[3j00]] – EcRPS6 + 16S RRNA + FTSQ + apolipoprotein A-I<br />
 
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[[2ykr]] – EcRPS6 + 16S RRNA + GMPPNP + GTPase RSGA<br />
 
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[[4a2i]] – EcRPS6 + 16S RRNA + GTPase RSGA – Cryo EM<br />
 
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[[4adv]] - EcRPS6 + 16S RRNA + methyltransferase – Cryo EM<br />
 
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[[3v22]], [[3v24]], [[3v26]], [[3v28]] – TtRPS6 in 30S ribosomal subunit +16S RRNA +THX + modulation factor<br />
 
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[[3v2c]], [[3v2e]] – TtRPS6 in 30S ribosomal subunit +16S RRNA +THX + ribosome-associated inhibitor<br />
 
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[[3u5c]], [[3u5g]] - yRPS6 in 40S ribosomal subunit+ RACK1 + suppressor protein SMT1<br />
 
===S6 in part of small ribosomal subunit===
===S6 in part of small ribosomal subunit===
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[[1qd7]] – TtRPS6+TtRPS4+TtRPS5+TtRPS7+TtRPS8+TtRPS15+TtRPS17+TtRPS20+16S RRNA fragment<br />
[[1qd7]] – TtRPS6+TtRPS4+TtRPS5+TtRPS7+TtRPS8+TtRPS15+TtRPS17+TtRPS20+16S RRNA fragment<br />
[[1g1x]] - TtRPS6+TtRPS15+TtRPS18+16S RRNA fragment<br />
[[1g1x]] - TtRPS6+TtRPS15+TtRPS18+16S RRNA fragment<br />
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[[3j16]] – yRPS6 + yRPS24 + yRPS30 + yRPL6 + yRPL10 + yRPL11 + 18S RRNA + 28SRRNA + P-site tRNA – Cryo EM
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[[3j16]] – yRPS6 + yRPS24 + yRPS30 + yRPL6 + yRPL10 + yRPL11 + 18S RRNA + 28SRRNA + P-site tRNA – yeast - Cryo EM
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===S6 in small 40S ribosomal subunit===
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[[3j38]] - RPS6 in 40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – ''Drosophila melanogaster'' – Cryo-EM<br />
 
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[[3j3a]] - RPS6 in 40S ribosomal subunit + EF-2 + guanine nucleotide-binding protein – human – Cryo-EM<br />
 
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[[4kzx]] - rRPS6 in 40S ribosomal subunit+ RACK1 + EIF1 – rabbit – Cryo-EM<br />
 
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[[4kzy]] - rRPS6 in 40S ribosomal subunit+ RACK1 + EIF1 + EIF1A – Cryo-EM<br />
 
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[[4kzz]] - rRPS6 in 40S ribosomal subunit+ RACK1 + EIF1A + initiator tRNA – Cryo-EM<br />
 
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[[3zey]] - rRPS6 in 40S ribosomal subunit – ''Trypanosoma brucei'' – Cryo-EM<br />
 
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[[4bpe]], [[4bpn]], [[4bpo]], [[4bpp]] - rRPS6 in 40S ribosomal subunit+ 18SRRNA + EIF1 + EIF1A – ''Tetrahymena thermophila''<br />
 
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 08:57, 27 April 2014

Image:RPS6.png
Crystal Structure of Ribosomal protein S6 from 2zm6, chain F

Template:STRUCTURE 2bvz











Ribosomal protein S6 (RPS6) is one of the 22 proteins which belong to the of the bacterial ribosome. It has a role in regulating translation of RNAs that contain the 5' terminal sequence. It is regulated by ribosomal S6 kinase. The images at the left and at the right correspond to one representative RPS6, i.e. the crystal structure of Ribosomal protein S6 from Thermus thermophilus (2zm6, chain F).

Contents




3D Structures of Ribosomal protein S6

Updated on 27-April-2014

RPS6

2kjv – TtRPS6 – NMR - Thermus thermophilus
2kjw – TtRPS6 (mutant)– NMR
2bvz, 1ris, 3zzp – TtRPS6
2bxj, 1cqm, 1cqn, 1qjh, 1lou - TtRPS6 (mutant)
2j5a – RPS6 – Aquifex aeolicus
1vmb – RPS6 – Thermotoga maritima
3r3t – RPS6 – Bacillus anthracis

S6 in part of small ribosomal subunit

1qd7 – TtRPS6+TtRPS4+TtRPS5+TtRPS7+TtRPS8+TtRPS15+TtRPS17+TtRPS20+16S RRNA fragment
1g1x - TtRPS6+TtRPS15+TtRPS18+16S RRNA fragment
3j16 – yRPS6 + yRPS24 + yRPS30 + yRPL6 + yRPL10 + yRPL11 + 18S RRNA + 28SRRNA + P-site tRNA – yeast - Cryo EM

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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