4crw

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'''Unreleased structure'''
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==Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)==
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<StructureSection load='4crw' size='340' side='right' caption='[[4crw]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4crw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CRW OCA]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gml|4gml]], [[4gmj|4gmj]], [[2wax|2wax]], [[2way|2way]]</td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4crw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4crw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4crw RCSB], [http://www.ebi.ac.uk/pdbsum/4crw PDBsum]</span></td></tr>
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<table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/DDX6_HUMAN DDX6_HUMAN]] Note=A chromosomal aberration involving DDX6 may be a cause of hematopoietic tumors such as B-cell lymphomas. Translocation t(11;14)(q23;q32).
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== Function ==
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[[http://www.uniprot.org/uniprot/CNOT1_HUMAN CNOT1_HUMAN]] Belongs to the CCR4-NOT complex that functions as general transcription regulation complex. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors.<ref>PMID:10637334</ref> <ref>PMID:16778766</ref> [[http://www.uniprot.org/uniprot/DDX6_HUMAN DDX6_HUMAN]] In the process of mRNA degradation, may play a role in mRNA decapping.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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CCR4-NOT is a major effector complex in miRNA-mediated gene silencing. It is recruited to miRNA targets through interactions with tryptophan (W)-containing motifs in TNRC6/GW182 proteins and is required for both translational repression and degradation of miRNA targets. Here, we elucidate the structural basis for the repressive activity of CCR4-NOT and its interaction with TNRC6/GW182s. We show that the conserved CNOT9 subunit attaches to a domain of unknown function (DUF3819) in the CNOT1 scaffold. The resulting complex provides binding sites for TNRC6/GW182, and its crystal structure reveals tandem W-binding pockets located in CNOT9. We further show that the CNOT1 MIF4G domain interacts with the C-terminal RecA domain of DDX6, a translational repressor and decapping activator. The crystal structure of this complex demonstrates striking similarity to the eIF4G-eIF4A complex. Together, our data provide the missing physical links in a molecular pathway that connects miRNA target recognition with translational repression, deadenylation, and decapping.
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The entry 4crw is ON HOLD until Paper Publication
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A DDX6-CNOT1 Complex and W-Binding Pockets in CNOT9 Reveal Direct Links between miRNA Target Recognition and Silencing.,Chen Y, Boland A, Kuzuoglu-Ozturk D, Bawankar P, Loh B, Chang CT, Weichenrieder O, Izaurralde E Mol Cell. 2014 Apr 22. pii: S1097-2765(14)00267-6. doi:, 10.1016/j.molcel.2014.03.034. PMID:24768540<ref>PMID:24768540</ref>
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Authors: Chen, Y., Boland, A., Izaurralde, E., Weichenrieder, O.
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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</div>
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Description: Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Boland, A.]]
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[[Category: Chen, Y.]]
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[[Category: Izaurralde, E.]]
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[[Category: Weichenrieder, O.]]
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[[Category: Ccr4-not]]
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[[Category: Dead-box protein]]
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[[Category: Eif4a]]
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[[Category: Gene regulation]]
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[[Category: Helicase]]
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[[Category: Mirna]]
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[[Category: Mrna deadenylation]]
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[[Category: Mrna decapping]]
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[[Category: Mrna silencing]]
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[[Category: P-body]]
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[[Category: P54]]
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[[Category: Rck]]
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[[Category: Translation]]
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[[Category: Translational repression]]

Revision as of 08:14, 7 May 2014

Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)

4crw, resolution 1.75Å

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