4crw
From Proteopedia
(Difference between revisions)
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- | ''' | + | ==Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)== |
+ | <StructureSection load='4crw' size='340' side='right' caption='[[4crw]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4crw]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4CRW OCA]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gml|4gml]], [[4gmj|4gmj]], [[2wax|2wax]], [[2way|2way]]</td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4crw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4crw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4crw RCSB], [http://www.ebi.ac.uk/pdbsum/4crw PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | == Disease == | ||
+ | [[http://www.uniprot.org/uniprot/DDX6_HUMAN DDX6_HUMAN]] Note=A chromosomal aberration involving DDX6 may be a cause of hematopoietic tumors such as B-cell lymphomas. Translocation t(11;14)(q23;q32). | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/CNOT1_HUMAN CNOT1_HUMAN]] Belongs to the CCR4-NOT complex that functions as general transcription regulation complex. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors.<ref>PMID:10637334</ref> <ref>PMID:16778766</ref> [[http://www.uniprot.org/uniprot/DDX6_HUMAN DDX6_HUMAN]] In the process of mRNA degradation, may play a role in mRNA decapping. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | CCR4-NOT is a major effector complex in miRNA-mediated gene silencing. It is recruited to miRNA targets through interactions with tryptophan (W)-containing motifs in TNRC6/GW182 proteins and is required for both translational repression and degradation of miRNA targets. Here, we elucidate the structural basis for the repressive activity of CCR4-NOT and its interaction with TNRC6/GW182s. We show that the conserved CNOT9 subunit attaches to a domain of unknown function (DUF3819) in the CNOT1 scaffold. The resulting complex provides binding sites for TNRC6/GW182, and its crystal structure reveals tandem W-binding pockets located in CNOT9. We further show that the CNOT1 MIF4G domain interacts with the C-terminal RecA domain of DDX6, a translational repressor and decapping activator. The crystal structure of this complex demonstrates striking similarity to the eIF4G-eIF4A complex. Together, our data provide the missing physical links in a molecular pathway that connects miRNA target recognition with translational repression, deadenylation, and decapping. | ||
- | + | A DDX6-CNOT1 Complex and W-Binding Pockets in CNOT9 Reveal Direct Links between miRNA Target Recognition and Silencing.,Chen Y, Boland A, Kuzuoglu-Ozturk D, Bawankar P, Loh B, Chang CT, Weichenrieder O, Izaurralde E Mol Cell. 2014 Apr 22. pii: S1097-2765(14)00267-6. doi:, 10.1016/j.molcel.2014.03.034. PMID:24768540<ref>PMID:24768540</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Boland, A.]] | ||
+ | [[Category: Chen, Y.]] | ||
+ | [[Category: Izaurralde, E.]] | ||
+ | [[Category: Weichenrieder, O.]] | ||
+ | [[Category: Ccr4-not]] | ||
+ | [[Category: Dead-box protein]] | ||
+ | [[Category: Eif4a]] | ||
+ | [[Category: Gene regulation]] | ||
+ | [[Category: Helicase]] | ||
+ | [[Category: Mirna]] | ||
+ | [[Category: Mrna deadenylation]] | ||
+ | [[Category: Mrna decapping]] | ||
+ | [[Category: Mrna silencing]] | ||
+ | [[Category: P-body]] | ||
+ | [[Category: P54]] | ||
+ | [[Category: Rck]] | ||
+ | [[Category: Translation]] | ||
+ | [[Category: Translational repression]] |
Revision as of 08:14, 7 May 2014
Complex of human DDX6 (RECA-C) and CNOT1 (MIF4G)
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Categories: Boland, A. | Chen, Y. | Izaurralde, E. | Weichenrieder, O. | Ccr4-not | Dead-box protein | Eif4a | Gene regulation | Helicase | Mirna | Mrna deadenylation | Mrna decapping | Mrna silencing | P-body | P54 | Rck | Translation | Translational repression