2wul
From Proteopedia
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- | [[ | + | ==CRYSTAL STRUCTURE OF THE HUMAN GLUTAREDOXIN 5 WITH BOUND GLUTATHIONE IN AN FES CLUSTER== |
+ | <StructureSection load='2wul' size='340' side='right' caption='[[2wul]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[2wul]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2wem 2wem]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WUL OCA]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wul OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wul RCSB], [http://www.ebi.ac.uk/pdbsum/2wul PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wu/2wul_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Human glutaredoxin 5 (GLRX5) is an evolutionarily conserved thiol-disulfide oxidoreductase that has a direct role in the maintenance of normal cytosolic and mitochondrial iron homeostasis and its expression affects haem biosynthesis and erythropoiesis. We have crystallised the human GLRX5 bound to two [2Fe2S] clusters and four glutathione (GSH) molecules. The crystal structure revealed a tetrameric organisation with the [2Fe2S] clusters buried in the interior and shielded from the solvent by the conserved beta1-alpha2 loop, Phe69 and the GSH molecules. Each [2Fe2S] cluster is ligated by the N-terminal active site cysteine (Cys67) thiols contributed by two protomers and two cysteine thiols from two GSH. The two subunits coordinating the cluster are in a more extended conformation compared to FeS-bound human GLRX2 and the intersubunit interactions are more extensive and involve conserved residues among monothiol GLRXs. Gelfiltration chromatography and analytical ultracentrifugation supported a tetrameric organisation of holo GLRX5 while the apo protein is monomeric. Mass spectrometry analyses revealed glutathionylation of the cysteines in the absence of the [2Fe2S] cluster, which would protect them from further oxidation and possibly facilitate cluster transfer/acceptance. Apo GLRX5 reduced glutathione mixed disulfides with a rate 100 times slower than GLRX2 and was active as a glutathione-dependent electron donor for mammalian ribonucleotide reductase. | ||
- | + | The Crystal structure of human GLRX5: iron sulphur cluster coordination, tetrameric assembly and monomer activity.,Johansson C, Roos AK, Montano SJ, Sengupta R, Filippakopoulos P, Guo K, von Delft F, Holmgren A, Oppermann U, Kavanagh KL Biochem J. 2010 Oct 29. PMID:21029046<ref>PMID:21029046</ref> | |
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- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | + | <references/> | |
- | + | __TOC__ | |
- | + | </StructureSection> | |
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- | == | + | |
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[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Arrowsmith, C H.]] | [[Category: Arrowsmith, C H.]] |
Revision as of 08:34, 7 May 2014
CRYSTAL STRUCTURE OF THE HUMAN GLUTAREDOXIN 5 WITH BOUND GLUTATHIONE IN AN FES CLUSTER
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Categories: Homo sapiens | Arrowsmith, C H. | Bountra, C. | Chaikuad, A. | Cooper, C D.O. | Delft, F Von. | Edwards, A. | Guo, K. | Johansson, C. | Kavanagh, K L. | Oppermann, U. | Pike, A C.W. | Pilka, E S. | Roos, A K. | Weigelt, J. | Yue, W W. | Chromosome 14 open reading frame 87 | Flb4739 | Glrx5 | Oxidoreductase | Pr01238 | Thioredoxin family