Sandbox Reserved 932

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=== Denmotoxin belongs to a family of non-conventional three-finger toxins ===
=== Denmotoxin belongs to a family of non-conventional three-finger toxins ===
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Three-finger toxins (3FTXs) are the most common family of snake venom proteins with a conserved structure. The core structure of 3FTXs is formed by <scene name='57/579702/Three_fingers/1'>three polypeptide loops</scene> joined together by cysteine bridges.
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Three-finger toxins (3FTXs) are the most common family of snake venom proteins with a conserved structure. The core structure of 3FTXs is formed by <scene name='57/579702/Three_fingers/1'>three polypeptide loops</scene> joined together by cysteine bridges. Denmotoxin has several features which classify it as a non-conventional 3FTX. Denmotoxin has a twist at the tip of the central loop originating from a kink in a proline residue (Pro40).
===Structure===
===Structure===

Revision as of 10:04, 15 May 2014

This Sandbox is Reserved from 01/04/2014, through 30/06/2014 for use in the course "510042. Protein structure, function and folding" taught by Prof Adrian Goldman, Tommi Kajander, Taru Meri, Konstantin Kogan and Juho Kellosalo at the University of Helsinki. This reservation includes Sandbox Reserved 923 through Sandbox Reserved 947.
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B. Dendrophila monomeric toxin (Denmotoxin) is the primary protein of snake venom used by Boiga dendrophila. This colubrid snake lives in Southest Asian lowland rainforest and mangrove swamps using birds as its primary prey.

One of the most well characterized snake venom protein families is the Three-finger-toxins (3FTX). These proteins have three β-stranded finger-like loops, stabilized by four disulphide bridges on the surface of a globular core. In non-convential 3TFXs a fifth disulphide bridge can be present as is the case in Denmotoxin.

How the overall structure looks like? Subunits orientation, chains: the number and relative positions, etc.

Denmotoxin

Structure of denmotoxin (PDB entry 2H5F)

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Additional Information

References

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