This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3lft

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3lft" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3lft.png|left|200px]]
+
==The Crystal Structure of the ABC domain in complex with L-Trp from Streptococcus pneumonia to 1.35A==
-
 
+
<StructureSection load='3lft' size='340' side='right' caption='[[3lft]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
-
<!--
+
== Structural highlights ==
-
The line below this paragraph, containing "STRUCTURE_3lft", creates the "Structure Box" on the page.
+
<table><tr><td colspan='2'>[[3lft]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LFT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LFT FirstGlance]. <br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRP:TRYPTOPHAN'>TRP</scene><br>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SP_1069 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 Streptococcus pneumoniae])</td></tr>
-
-->
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lft FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lft OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lft RCSB], [http://www.ebi.ac.uk/pdbsum/3lft PDBsum]</span></td></tr>
-
{{STRUCTURE_3lft| PDB=3lft | SCENE= }}
+
<table>
-
 
+
== Evolutionary Conservation ==
-
===The Crystal Structure of the ABC domain in complex with L-Trp from Streptococcus pneumonia to 1.35A===
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lf/3lft_consurf.spt"</scriptWhenChecked>
-
[[3lft]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LFT OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Streptococcus pneumoniae]]
[[Category: Streptococcus pneumoniae]]
[[Category: Abdullah, J.]]
[[Category: Abdullah, J.]]

Revision as of 09:39, 21 May 2014

The Crystal Structure of the ABC domain in complex with L-Trp from Streptococcus pneumonia to 1.35A

3lft, resolution 1.35Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3lft"
Views
Personal tools
Navigation
Toolbox