1ae7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1ae7.gif|left|200px]]<br /><applet load="1ae7" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1ae7.gif|left|200px]]
-
caption="1ae7, resolution 2.0&Aring;" />
+
 
-
'''NOTEXIN, A PRESYNAPTIC NEUROTOXIC PHOSPHOLIPASE A2'''<br />
+
{{Structure
 +
|PDB= 1ae7 |SIZE=350|CAPTION= <scene name='initialview01'>1ae7</scene>, resolution 2.0&Aring;
 +
|SITE= <scene name='pdbsite=CAL:Site+*Cal*+Comprises+Those+Residues+Forming+The+Ca2++Bin+...'>CAL</scene> and <scene name='pdbsite=CNR:Site+*Cnr*+Comprises+Those+Residues+Forming+The+Catalyti+...'>CNR</scene>
 +
|LIGAND= <scene name='pdbligand=SO4:SULFATE ION'>SO4</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4]
 +
|GENE=
 +
}}
 +
 
 +
'''NOTEXIN, A PRESYNAPTIC NEUROTOXIC PHOSPHOLIPASE A2'''
 +
 
==Overview==
==Overview==
Line 7: Line 16:
==About this Structure==
==About this Structure==
-
1AE7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Notechis_scutatus_scutatus Notechis scutatus scutatus] with <scene name='pdbligand=SO4:'>SO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] Known structural/functional Sites: <scene name='pdbsite=CAL:Site+*Cal*+Comprises+Those+Residues+Forming+The+Ca2++Bin+...'>CAL</scene> and <scene name='pdbsite=CNR:Site+*Cnr*+Comprises+Those+Residues+Forming+The+Catalyti+...'>CNR</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AE7 OCA].
+
1AE7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Notechis_scutatus_scutatus Notechis scutatus scutatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AE7 OCA].
==Reference==
==Reference==
-
The three-dimensional structure of notexin, a presynaptic neurotoxic phospholipase A2 at 2.0 A resolution., Westerlund B, Nordlund P, Uhlin U, Eaker D, Eklund H, FEBS Lett. 1992 Apr 20;301(2):159-64. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=1568473 1568473]
+
The three-dimensional structure of notexin, a presynaptic neurotoxic phospholipase A2 at 2.0 A resolution., Westerlund B, Nordlund P, Uhlin U, Eaker D, Eklund H, FEBS Lett. 1992 Apr 20;301(2):159-64. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/1568473 1568473]
[[Category: Notechis scutatus scutatus]]
[[Category: Notechis scutatus scutatus]]
[[Category: Phospholipase A(2)]]
[[Category: Phospholipase A(2)]]
Line 26: Line 35:
[[Category: venom]]
[[Category: venom]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:43:31 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 09:56:17 2008''

Revision as of 07:56, 20 March 2008


PDB ID 1ae7

Drag the structure with the mouse to rotate
, resolution 2.0Å
Sites: and
Ligands:
Activity: Phospholipase A(2), with EC number 3.1.1.4
Coordinates: save as pdb, mmCIF, xml



NOTEXIN, A PRESYNAPTIC NEUROTOXIC PHOSPHOLIPASE A2


Overview

The three-dimensional structure of notexin has been solved by molecular replacement methods. The structure has been refined at 2.0 A resolution to a crystallographic R-value of 16.5% with good stereo-chemistry. The core of the protein is very similar to other phospholipase A2s (PLA2 s) but several parts of the molecule are distinctly different. The most significant differences from PLA2 s from bovine pancreas and rattlesnake occur in the stretches 56-80 and 85-89. Residue 69, which has been shown to be important for phospholipase binding, has a different conformation and different interactions than in other known PLA2s. The C alpha positions for residues 86-88 differ by about 6 A from both the bovine and the rattlesnake enzyme. The crystals contain no Ca2+ ions. Instead, a water molecule occupies the calcium site.

About this Structure

1AE7 is a Single protein structure of sequence from Notechis scutatus scutatus. Full crystallographic information is available from OCA.

Reference

The three-dimensional structure of notexin, a presynaptic neurotoxic phospholipase A2 at 2.0 A resolution., Westerlund B, Nordlund P, Uhlin U, Eaker D, Eklund H, FEBS Lett. 1992 Apr 20;301(2):159-64. PMID:1568473

Page seeded by OCA on Thu Mar 20 09:56:17 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools