This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ghd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ghd" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3ghd.png|left|200px]]
+
==Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain==
-
 
+
<StructureSection load='3ghd' size='340' side='right' caption='[[3ghd]], [[Resolution|resolution]] 1.81&Aring;' scene=''>
-
<!--
+
== Structural highlights ==
-
The line below this paragraph, containing "STRUCTURE_3ghd", creates the "Structure Box" on the page.
+
<table><tr><td colspan='2'>[[3ghd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fio 3fio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GHD FirstGlance]. <br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ghd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ghd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ghd RCSB], [http://www.ebi.ac.uk/pdbsum/3ghd PDBsum], [http://www.topsan.org/Proteins/MCSG/3ghd TOPSAN]</span></td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<table>
-
-->
+
== Evolutionary Conservation ==
-
{{STRUCTURE_3ghd| PDB=3ghd | SCENE= }}
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
===Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain===
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gh/3ghd_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
==About this Structure==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[3ghd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3fio 3fio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GHD OCA].
+
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
[[Category: Brown, G.]]
[[Category: Brown, G.]]

Revision as of 09:46, 21 May 2014

Crystal structure of a cystathionine beta-synthase domain protein fused to a Zn-ribbon-like domain

3ghd, resolution 1.81Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ghd"
Views
Personal tools
Navigation
Toolbox