3dme

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m (Protected "3dme" [edit=sysop:move=sysop])
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[[Image:3dme.png|left|200px]]
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==Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141==
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<StructureSection load='3dme' size='340' side='right' caption='[[3dme]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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<!--
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== Structural highlights ==
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The line below this paragraph, containing "STRUCTURE_3dme", creates the "Structure Box" on the page.
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<table><tr><td colspan='2'>[[3dme]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DME OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DME FirstGlance]. <br>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene><br>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BP3253 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=520 Bordetella pertussis])</td></tr>
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or leave the SCENE parameter empty for the default display.
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dme FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dme OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dme RCSB], [http://www.ebi.ac.uk/pdbsum/3dme PDBsum]</span></td></tr>
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-->
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<table>
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{{STRUCTURE_3dme| PDB=3dme | SCENE= }}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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===Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141===
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/3dme_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[3dme]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DME OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Bordetella pertussis]]
[[Category: Bordetella pertussis]]
[[Category: Abashidze, M.]]
[[Category: Abashidze, M.]]

Revision as of 09:46, 21 May 2014

Crystal structure of conserved exported protein from Bordetella pertussis. NorthEast Structural Genomics target BeR141

3dme, resolution 1.70Å

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OCA

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