3gz3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{Seed}}
+
==Leishmania major Dihydroorotate Dehydrogenase in complex with orotate==
-
[[Image:3gz3.jpg|left|200px]]
+
<StructureSection load='3gz3' size='340' side='right' caption='[[3gz3]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
<!--
+
<table><tr><td colspan='2'>[[3gz3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GZ3 FirstGlance]. <br>
-
The line below this paragraph, containing "STRUCTURE_3gz3", creates the "Structure Box" on the page.
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ORO:OROTIC+ACID'>ORO</scene><br>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3c3n|3c3n]], [[3gye|3gye]]</td></tr>
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LmjF16.0530, pyrD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr>
-
or leave the SCENE parameter empty for the default display.
+
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydroorotate_oxidase Dihydroorotate oxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.3.1 1.3.3.1] </span></td></tr>
-
-->
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gz3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gz3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gz3 RCSB], [http://www.ebi.ac.uk/pdbsum/3gz3 PDBsum]</span></td></tr>
-
{{STRUCTURE_3gz3| PDB=3gz3 | SCENE= }}
+
<table>
-
 
+
== Evolutionary Conservation ==
-
===Leishmania major Dihydroorotate Dehydrogenase in complex with orotate===
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gz/3gz3_consurf.spt"</scriptWhenChecked>
-
3GZ3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GZ3 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Dihydroorotate oxidase]]
[[Category: Dihydroorotate oxidase]]
[[Category: Leishmania major]]
[[Category: Leishmania major]]
Line 23: Line 29:
[[Category: Orotate]]
[[Category: Orotate]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
- 
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 28 11:03:16 2010''
 

Revision as of 09:52, 21 May 2014

Leishmania major Dihydroorotate Dehydrogenase in complex with orotate

3gz3, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox