1ayl

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[[Image:1ayl.gif|left|200px]]<br /><applet load="1ayl" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1ayl.gif|left|200px]]
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caption="1ayl, resolution 1.8&Aring;" />
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'''PHOSPHOENOLPYRUVATE CARBOXYKINASE'''<br />
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{{Structure
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|PDB= 1ayl |SIZE=350|CAPTION= <scene name='initialview01'>1ayl</scene>, resolution 1.8&Aring;
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|SITE= <scene name='pdbsite=ACT:Putative+Active+Site+Residues'>ACT</scene>
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|LIGAND= <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=ATP:ADENOSINE-5'-TRIPHOSPHATE'>ATP</scene>
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|ACTIVITY= [http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxykinase_(ATP) Phosphoenolpyruvate carboxykinase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.49 4.1.1.49]
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|GENE=
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}}
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'''PHOSPHOENOLPYRUVATE CARBOXYKINASE'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1AYL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with <scene name='pdbligand=OXL:'>OXL</scene>, <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=ATP:'>ATP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxykinase_(ATP) Phosphoenolpyruvate carboxykinase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.49 4.1.1.49] Known structural/functional Site: <scene name='pdbsite=ACT:Putative+Active+Site+Residues'>ACT</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AYL OCA].
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1AYL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AYL OCA].
==Reference==
==Reference==
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Snapshot of an enzyme reaction intermediate in the structure of the ATP-Mg2+-oxalate ternary complex of Escherichia coli PEP carboxykinase., Tari LW, Matte A, Pugazhenthi U, Goldie H, Delbaere LT, Nat Struct Biol. 1996 Apr;3(4):355-63. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8599762 8599762]
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Snapshot of an enzyme reaction intermediate in the structure of the ATP-Mg2+-oxalate ternary complex of Escherichia coli PEP carboxykinase., Tari LW, Matte A, Pugazhenthi U, Goldie H, Delbaere LT, Nat Struct Biol. 1996 Apr;3(4):355-63. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8599762 8599762]
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Phosphoenolpyruvate carboxykinase (ATP)]]
[[Category: Phosphoenolpyruvate carboxykinase (ATP)]]
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[[Category: protein-atp complex]]
[[Category: protein-atp complex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 11:49:38 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:03:56 2008''

Revision as of 08:03, 20 March 2008


PDB ID 1ayl

Drag the structure with the mouse to rotate
, resolution 1.8Å
Sites:
Ligands: , and
Activity: Phosphoenolpyruvate carboxykinase (ATP), with EC number 4.1.1.49
Coordinates: save as pdb, mmCIF, xml



PHOSPHOENOLPYRUVATE CARBOXYKINASE


Overview

We report the 1.8 A crystal structure of adenosine triphosphate (ATP)-magnesium-oxalate bound phosphoenolpyruvate carboxykinase (PCK) from Escherichia coli. ATP binding induces a 20 degree hinge-like rotation of the N- and C-terminal domains which closes the active-site cleft. PCK possesses a novel nucleotide-binding fold, particularly in the adenine-binding region, where the formation of a cis backbone torsion angle in a loop glycine residue promotes intimate contacts between the adenine-binding loop and adenine, while stabilizing a syn conformation of the base. This complex represents a reaction intermediate analogue along the pathway of the conversion of oxaloacetate to phosphoenolpyruvate, and provides insight into the mechanistic details of the chemical reaction catalysed by this enzyme.

About this Structure

1AYL is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Snapshot of an enzyme reaction intermediate in the structure of the ATP-Mg2+-oxalate ternary complex of Escherichia coli PEP carboxykinase., Tari LW, Matte A, Pugazhenthi U, Goldie H, Delbaere LT, Nat Struct Biol. 1996 Apr;3(4):355-63. PMID:8599762

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