4dx0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:4dx0.jpg|left|200px]]
+
==Structure of the 14-3-3/PMA2 complex stabilized by a pyrazole derivative==
 +
<StructureSection load='4dx0' size='340' side='right' caption='[[4dx0]], [[Resolution|resolution]] 3.40&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4dx0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_plumbaginifolia Nicotiana plumbaginifolia] and [http://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DX0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DX0 FirstGlance]. <br>
 +
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=0MT:4-[(4R)-4-(4-NITROPHENYL)-6-OXIDANYLIDENE-3-PHENYL-1,4-DIHYDROPYRROLO[3,4-C]PYRAZOL-5-YL]BENZOIC+ACID'>0MT</scene><br>
 +
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3m50|3m50]], [[3m51|3m51]]</td></tr>
 +
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Proton-exporting_ATPase Proton-exporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.6 3.6.3.6] </span></td></tr>
 +
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dx0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dx0 RCSB], [http://www.ebi.ac.uk/pdbsum/4dx0 PDBsum]</span></td></tr>
 +
<table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Modulation of protein-protein interactions (PPIs) is a highly demanding, but also a very promising approach in chemical biology and targeted drug discovery. In contrast to inhibiting PPIs with small, chemically tractable molecules, stabilisation of these interactions can only be achieved with complex natural products, like rapamycin, FK506, taxol, forskolin, brefeldin and fusicoccin. Fusicoccin stabilises the activatory complex of the plant H(+) -ATPase PMA2 and 14-3-3 proteins. Recently, we have shown that the stabilising effect of fusicoccin could be mimicked by a trisubstituted pyrrolinone (pyrrolidone1, 1). Here, we report the synthesis, functional activity and crystal structure of derivatives of 1 that stabilise the 14-3-3-PMA2 complex. With a limited compound collection three modifications that are important for activity enhancement could be determined: 1) conversion of the pyrrolinone scaffold into a pyrazole, 2) introduction of a tetrazole moiety to the phenyl ring that contacts PMA2, and 3) addition of a bromine to the phenyl ring that exclusively contacts the 14-3-3 protein. The crystal structure of a pyrazole derivative of 1 in complex with 14-3-3 and PMA2 revealed that the more rigid core of this molecule positions the stabiliser deeper into the rim of the interface, enlarging especially the contact surface to PMA2. Combination of the aforementioned features gave rise to a molecule (37) that displays a threefold increase in stabilising the 14-3-3-PMA2 complex over 1. Compound 37 and the other active derivatives show no effect on two other important 14-3-3 protein-protein interactions, that is, with CRaf and p53. This is the first study that describes the successful optimisation of a PPI stabiliser identified by screening.
-
<!--
+
An Optimised Small-Molecule Stabiliser of the 14-3-3-PMA2 Protein-Protein Interaction.,Richter A, Rose R, Hedberg C, Waldmann H, Ottmann C Chemistry. 2012 May 21;18(21):6520-7. doi: 10.1002/chem.201103761. Epub 2012 Mar , 29. PMID:22467351<ref>PMID:22467351</ref>
-
The line below this paragraph, containing "STRUCTURE_4dx0", creates the "Structure Box" on the page.
+
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
-
or leave the SCENE parameter empty for the default display.
+
-
-->
+
-
{{STRUCTURE_4dx0| PDB=4dx0 | SCENE= }}
+
-
===Structure of the 14-3-3/PMA2 complex stabilized by a pyrazole derivative===
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22467351}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 22467351 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_22467351}}
+
-
 
+
-
==About this Structure==
+
-
[[4dx0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Nicotiana_plumbaginifolia Nicotiana plumbaginifolia] and [http://en.wikipedia.org/wiki/Nicotiana_tabacum Nicotiana tabacum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DX0 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022467351</ref><references group="xtra"/>
+
[[Category: Nicotiana plumbaginifolia]]
[[Category: Nicotiana plumbaginifolia]]
[[Category: Nicotiana tabacum]]
[[Category: Nicotiana tabacum]]

Revision as of 08:34, 5 June 2014

Structure of the 14-3-3/PMA2 complex stabilized by a pyrazole derivative

4dx0, resolution 3.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox