2atg

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[[Image:2atg.png|left|200px]]
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==NMR structure of Retrocyclin-2 in SDS==
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<StructureSection load='2atg' size='340' side='right' caption='[[2atg]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2atg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ATG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ATG FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2atg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2atg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2atg RCSB], [http://www.ebi.ac.uk/pdbsum/2atg PDBsum]</span></td></tr>
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<table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Retrocyclins are circular mini-defensins with significant potential as agents against human immunodeficiency virus, influenza A, and herpes simplex virus. Retrocyclins bind carbohydrate-containing surface molecules such as gp120 and CD4 with high affinity (Kd, 10-100 nM), promoting their localization on cell membranes. The structural features important for activity have yet to be fully elucidated, but here, we have determined the first three-dimensional structure of a retrocyclin, namely, one of the most potent forms, retrocyclin-2. In the presence of SDS micelles, a well-defined beta-hairpin braced by three disulfide bonds that defines the cystine ladder motif is present. By contrast, a well-defined structure could not be determined in aqueous solution, suggesting that the presence of SDS micelles stabilizes the extended conformation of retrocyclin-2. Translational diffusion measurements indicate that retrocyclin-2 interacts with the SDS micelles, and such a membrane-like interaction may be an important feature in the mechanism of action of these antimicrobial peptides. Analytical ultracentrifugation and the NMR data indicated that retrocyclin-2 self-associates to form a trimer in a concentration-dependent manner. The ability to self-associate may contribute to the high-affinity binding of retrocyclins for glycoproteins by increasing the valency and enhancing the ability of retrocyclins to cross-link cell surface glycoproteins.
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{{STRUCTURE_2atg| PDB=2atg | SCENE= }}
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Retrocyclin-2: structural analysis of a potent anti-HIV theta-defensin.,Daly NL, Chen YK, Rosengren KJ, Marx UC, Phillips ML, Waring AJ, Wang W, Lehrer RI, Craik DJ Biochemistry. 2007 Sep 4;46(35):9920-8. Epub 2007 Aug 8. PMID:17685559<ref>PMID:17685559</ref>
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===NMR structure of Retrocyclin-2 in SDS===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_17685559}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[2atg]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ATG OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:017685559</ref><references group="xtra"/>
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[[Category: Chen, Y K.]]
[[Category: Chen, Y K.]]
[[Category: Craik, D J.]]
[[Category: Craik, D J.]]

Revision as of 06:53, 9 June 2014

NMR structure of Retrocyclin-2 in SDS

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