Sandbox bcce03

From Proteopedia

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 You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
 How is structure related to function in Carp Parvalbumin?
-<scene name='59/596444/Carp_parvabumin_4cpv
 == Function:  <scene name='59/596444/Carp_parvabumin_4cpv/1'>TextToBeDisplayed</scene>Carp Parvalbumin found in Carp (Cyprinus Carpio)  is known to bind calcium ions.==

Revision as of 14:59, 6 August 2014

How is Structure Related to Function in Carp Parvalbumin?

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This is a default text for your page Sandbox bcce03. Click above on edit this page to modify. Be careful with the < and > signs.

You may include any references to papers as in: the use of JSmol in Proteopedia ^[1] or to the article describing Jmol ^[2] to the rescue. How is structure related to function in Carp Parvalbumin?

1 Function: jmolSetTarget('1');jmolLink('delete $clickGreenLinkEcho; refresh;setL = \"setLoading();\"; javascript @setL; script /wiki/extensions/Proteopedia/spt/wipeFullLoadButton.spt; ~green = \"TextToBeDisplayed\"; isosurface DELETE; scn = load(\"/wiki/scripts/59/596444/Carp_parvabumin_4cpv/1.spt\"); scn = scn.replace(\'# initialize;\', \'# initialize;\nclearSceneScaleCmd = \"clearSceneScale();\"; javascript @clearSceneScaleCmd;\n\'); scn = scn.replace(\'_setSelectionState;\', \'_setSelectionState; message Scene_finished;\'); scn = scn.replace(\'_setState;\', \'_setState; setButtonsStartingState();\'); scn = scn.replace(\'DORESIZE\', \'\'); script inline scn;','TextToBeDisplayed','TextToBeDisplayed');Carp Parvalbumin found in Carp (Cyprinus Carpio) is known to bind calcium ions.
2 Disease: Currently, Parvalbumin is not known to be directly related to any diseased state.
3 Relevance: However, the basic structure of Parvalbumin, and its structural calcium binding motif, the EF hand is found in other calcium proteins such as troponin C, involved in skeletal and cardiac muscular contraction, and calmodulin, which is involved in signal transduction
4 Structural highlights: Parvalbumin is primarily helical, consisting of six alpha helices, labelled, A, B, C, D, E, and F. The CD calcium binding loop binds one calcium ion (in green); The EF calcium binding loop binds one additional calcium ion (in green).

Function: Carp Parvalbumin found in Carp (Cyprinus Carpio) is known to bind calcium ions.

Disease: Currently, Parvalbumin is not known to be directly related to any diseased state.

Relevance: However, the basic structure of Parvalbumin, and its structural calcium binding motif, the EF hand is found in other calcium proteins such as troponin C, involved in skeletal and cardiac muscular contraction, and calmodulin, which is involved in signal transduction

Structural highlights: Parvalbumin is primarily helical, consisting of six alpha helices, labelled, A, B, C, D, E, and F. The CD calcium binding loop binds one calcium ion (in green); The EF calcium binding loop binds one additional calcium ion (in green).

This is a sample scene created with SAT to by Group, and another to make of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.

References

↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

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Sandbox bcce03

From Proteopedia

Revision as of 14:59, 6 August 2014

How is Structure Related to Function in Carp Parvalbumin?

Contents

Function: Carp Parvalbumin found in Carp (Cyprinus Carpio) is known to bind calcium ions.

Disease: Currently, Parvalbumin is not known to be directly related to any diseased state.

Relevance: However, the basic structure of Parvalbumin, and its structural calcium binding motif, the EF hand is found in other calcium proteins such as troponin C, involved in skeletal and cardiac muscular contraction, and calmodulin, which is involved in signal transduction

Structural highlights: Parvalbumin is primarily helical, consisting of six alpha helices, labelled, A, B, C, D, E, and F. The CD calcium binding loop binds one calcium ion (in green); The EF calcium binding loop binds one additional calcium ion (in green).

References

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