3wmt
From Proteopedia
(Difference between revisions)
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- | ''' | + | ==Crystal structure of feruloyl esterase B from Aspergillus oryzae== |
+ | <StructureSection load='3wmt' size='340' side='right' caption='[[3wmt]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3wmt]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WMT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WMT FirstGlance]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Feruloyl_esterase Feruloyl esterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.73 3.1.1.73] </span></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wmt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wmt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wmt RCSB], [http://www.ebi.ac.uk/pdbsum/3wmt PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Two hypothetical proteins XP_001818628 and XP_001819091 (designated AoFaeB and AoFaeC, respectively), showing sequence identity with known type-C feruloyl esterases, have been found in the genomic sequence of Aspergillus oryzae. We cloned the putative A. oryzae feruloyl esterase-encoding genes and expressed them in Pichia pastoris. Both purified recombinant AoFaeB (rAoFaeB) and AoFaeC (rAoFaeC) had apparent relative molecular masses of 61,000 and 75,000, respectively, on sodium dodecyl sulfate-polyacrylamide gel electrophoresis. After N-deglycosylation, both proteins had a relative molecular mass of 55,000. The optimum pH for rAoFaeB was 6.0, although it was stable at pH values ranging from 3.0 to 9.0; rAoFaeC had an optimum pH of 6.0 and was stable in the pH range of 7.0-10.0. Thermostability of rAoFaeC was greater than that of rAoFaeB. Whereas rAoFaeC displayed hydrolytic activity toward methyl caffeate, methyl p-coumarate, methyl ferulate, and methyl sinapate, rAoFaeB displayed hydrolytic activity toward methyl caffeate, methyl p-coumarate, and methyl ferulate but not toward methyl sinapate. Substrate specificity profiling of rAoFaeB and rAoFaeC revealed type-B and type-C feruloyl esterases, respectively. Ferulic acid was efficiently released from wheat arabinoxylan when both esterases were applied with xylanase from Thermomyces lanuginosus. Both recombinant proteins also exhibited hydrolytic activity toward chlorogenic acid. | ||
- | + | Characterization of two distinct feruloyl esterases, AoFaeB and AoFaeC, from Aspergillus oryzae.,Koseki T, Hori A, Seki S, Murayama T, Shiono Y Appl Microbiol Biotechnol. 2009 Jun;83(4):689-96. doi: 10.1007/s00253-009-1913-z., Epub 2009 Feb 26. PMID:19242690<ref>PMID:19242690</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Feruloyl esterase]] | ||
+ | [[Category: Fushinobu, S.]] | ||
+ | [[Category: Igarashi, K.]] | ||
+ | [[Category: Ishida, T.]] | ||
+ | [[Category: Koseki, T.]] | ||
+ | [[Category: Suzuki, K.]] | ||
+ | [[Category: Alpha/beta-hydrolase fold]] | ||
+ | [[Category: Extracellular]] | ||
+ | [[Category: Glycosylation]] | ||
+ | [[Category: Hydrolase]] |
Revision as of 02:19, 7 August 2014
Crystal structure of feruloyl esterase B from Aspergillus oryzae
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