1dpn

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[[Image:1dpn.gif|left|200px]]<br /><applet load="1dpn" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1dpn.gif|left|200px]]
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caption="1dpn, resolution 0.95&Aring;" />
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'''B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE'''<br />
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{{Structure
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|PDB= 1dpn |SIZE=350|CAPTION= <scene name='initialview01'>1dpn</scene>, resolution 0.95&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=MG:MAGNESIUM ION'>MG</scene>
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|ACTIVITY=
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|GENE=
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}}
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'''B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1DPN is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/ ] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DPN OCA].
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1DPN is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/ ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DPN OCA].
==Reference==
==Reference==
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X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution., Egli M, Tereshko V, Teplova M, Minasov G, Joachimiak A, Sanishvili R, Weeks CM, Miller R, Maier MA, An H, Dan Cook P, Manoharan M, Biopolymers. 1998;48(4):234-52. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=10699842 10699842]
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X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution., Egli M, Tereshko V, Teplova M, Minasov G, Joachimiak A, Sanishvili R, Weeks CM, Miller R, Maier MA, An H, Dan Cook P, Manoharan M, Biopolymers. 1998;48(4):234-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10699842 10699842]
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: An, H.]]
[[Category: An, H.]]
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[[Category: 0 95 a resolution structure]]
[[Category: 0 95 a resolution structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:19:04 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:42:20 2008''

Revision as of 08:42, 20 March 2008

Image:1dpn.gif


PDB ID 1dpn

Drag the structure with the mouse to rotate
, resolution 0.95Å
Ligands:
Coordinates: save as pdb, mmCIF, xml



B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE


Overview

We have determined single crystal structures of an A-DNA decamer and a B-DNA dodecamer at 0.83 and 0.95 A, respectively. The resolution of the former is the highest reported thus far for any right-handed nucleic acid duplex and the quality of the diffraction data allowed determination of the structure with direct methods. The structures reveal unprecedented details of DNA fine structure and hydration; in particular, we have reexamined the overall hydration of A- and B-form DNA, the distribution of water around phosphate groups, and features of the water structure that may underlie the B to A transition.

About this Structure

1DPN is a Protein complex structure of sequences from [1]. Full crystallographic information is available from OCA.

Reference

X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution., Egli M, Tereshko V, Teplova M, Minasov G, Joachimiak A, Sanishvili R, Weeks CM, Miller R, Maier MA, An H, Dan Cook P, Manoharan M, Biopolymers. 1998;48(4):234-52. PMID:10699842

Page seeded by OCA on Thu Mar 20 10:42:20 2008

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