1ens

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1ens.jpg|left|200px]]<br /><applet load="1ens" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:1ens.jpg|left|200px]]
-
caption="1ens, resolution 2.8&Aring;" />
+
 
-
'''CRYSTALS OF DEMETALLIZED CONCANAVALIN A SOAKED WITH COBALT HAVING A COBALT ION BOUND IN THE S1 SITE'''<br />
+
{{Structure
 +
|PDB= 1ens |SIZE=350|CAPTION= <scene name='initialview01'>1ens</scene>, resolution 2.8&Aring;
 +
|SITE=
 +
|LIGAND= <scene name='pdbligand=CO:COBALT (II) ION'>CO</scene>
 +
|ACTIVITY=
 +
|GENE=
 +
}}
 +
 
 +
'''CRYSTALS OF DEMETALLIZED CONCANAVALIN A SOAKED WITH COBALT HAVING A COBALT ION BOUND IN THE S1 SITE'''
 +
 
==Overview==
==Overview==
Line 7: Line 16:
==About this Structure==
==About this Structure==
-
1ENS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis] with <scene name='pdbligand=CO:'>CO</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ENS OCA].
+
1ENS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Canavalia_ensiformis Canavalia ensiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ENS OCA].
==Reference==
==Reference==
-
Sequential structural changes upon zinc and calcium binding to metal-free concanavalin A., Bouckaert J, Poortmans F, Wyns L, Loris R, J Biol Chem. 1996 Jul 5;271(27):16144-50. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8663112 8663112]
+
Sequential structural changes upon zinc and calcium binding to metal-free concanavalin A., Bouckaert J, Poortmans F, Wyns L, Loris R, J Biol Chem. 1996 Jul 5;271(27):16144-50. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8663112 8663112]
[[Category: Canavalia ensiformis]]
[[Category: Canavalia ensiformis]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 20: Line 29:
[[Category: agglutinin]]
[[Category: agglutinin]]
[[Category: cobalt]]
[[Category: cobalt]]
-
[[Category: concanavalin a]]
+
[[Category: concanavalin some]]
[[Category: plant lectin]]
[[Category: plant lectin]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:29:43 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 10:58:02 2008''

Revision as of 08:58, 20 March 2008


PDB ID 1ens

Drag the structure with the mouse to rotate
, resolution 2.8Å
Ligands:
Coordinates: save as pdb, mmCIF, xml



CRYSTALS OF DEMETALLIZED CONCANAVALIN A SOAKED WITH COBALT HAVING A COBALT ION BOUND IN THE S1 SITE


Overview

The lectin concanavalin A (ConA) sequentially binds a transition metal ion in the metal-binding site S1 and a calcium ion in the metal-binding site S2 to form its saccharide-binding site. Metal-free ConA crystals soaked with either Zn2+ (apoZn-ConA) or Co2+ (apoCo-ConA) display partial binding of these ions in the proto-transition metal-binding site, but no further conformational changes are observed. These structures can represent the very first step in going from metal-free ConA toward the holoprotein. In the co-crystals of metal-free ConA with Zn2+ (Zn-ConA), the zinc ion can fully occupy the S1 site. The positions of the carboxylate ligands Asp10 and Asp19 that bridge the S1 and S2 sites are affected. The ligation to Zn2+ orients Asp10 optimally for calcium ligation and stabilizes Asp19 by a hydrogen bond to one of its water ligands. The neutralizing and stabilizing effect of the binding of Zn2+ in S1 is necessary to allow for subsequent Ca2+ binding in the S2 site. However, the S2 site of monometallized ConA is still disrupted. The co-crystals of metal-free ConA with both Zn2+ and Ca2+ contain the active holoprotein (ConA ZnCa). Ca2+ has induced large conformational changes to stabilize its hepta-coordination in the S2 site, which comprise the trans to cis isomerization of the Ala207-Asp208 peptide bond accompanied by the formation of the saccharide-binding site. The Zn2+ ligation in ConA ZnCa is similar to Mn2+, Cd2+, Co2+, or Ni2+ ligation in the S1 site, in disagreement with earlier extended x-ray absorption fine structure results that suggested a lower coordination number for Zn2+.

About this Structure

1ENS is a Single protein structure of sequence from Canavalia ensiformis. Full crystallographic information is available from OCA.

Reference

Sequential structural changes upon zinc and calcium binding to metal-free concanavalin A., Bouckaert J, Poortmans F, Wyns L, Loris R, J Biol Chem. 1996 Jul 5;271(27):16144-50. PMID:8663112

Page seeded by OCA on Thu Mar 20 10:58:02 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools