2oog
From Proteopedia
(Difference between revisions)
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- | + | ==Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus== | |
- | + | <StructureSection load='2oog' size='340' side='right' caption='[[2oog]], [[Resolution|resolution]] 2.20Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2oog]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_n315 Staphylococcus aureus subsp. aureus n315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OOG FirstGlance]. <br> | |
- | + | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br> | |
- | + | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">glpQ, SA0820 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158879 Staphylococcus aureus subsp. aureus N315])</td></tr> | |
- | + | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycerophosphodiester_phosphodiesterase Glycerophosphodiester phosphodiesterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.4.46 3.1.4.46] </span></td></tr> | |
- | == | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oog OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2oog RCSB], [http://www.ebi.ac.uk/pdbsum/2oog PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/2oog TOPSAN]</span></td></tr> |
- | [[2oog]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_n315 Staphylococcus aureus subsp. aureus n315]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OOG OCA]. | + | <table> |
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2oog_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Phosphodiesterase|Phosphodiesterase]] | *[[Phosphodiesterase|Phosphodiesterase]] | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Glycerophosphodiester phosphodiesterase]] | [[Category: Glycerophosphodiester phosphodiesterase]] | ||
[[Category: Staphylococcus aureus subsp. aureus n315]] | [[Category: Staphylococcus aureus subsp. aureus n315]] |
Revision as of 07:04, 29 September 2014
Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus
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Categories: Glycerophosphodiester phosphodiesterase | Staphylococcus aureus subsp. aureus n315 | Almo, S C. | Burley, S K. | Fedorov, E. | Freeman, J. | Gheyi, T. | Maletic, M. | NYSGXRC, New York SGX Research Center for Structural Genomics. | Patskovsky, Y. | Powell, A. | Sauder, J M. | Smith, D. | Toro, R. | Wasserman, S R. | Glycerophosphoryl diester phosphodiesterase | Hydrolase | New york sgx research center for structural genomic | Nysgrc | Nysgxrc | Phosphatase | Protein structure initiative | Psi | Structural genomic