This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yb2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yb2" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1yb2.png|left|200px]]
+
==Structure of a putative methyltransferase from Thermoplasma acidophilum.==
-
 
+
<StructureSection load='1yb2' size='340' side='right' caption='[[1yb2]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-
{{STRUCTURE_1yb2| PDB=1yb2 | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YB2 FirstGlance]. <br>
-
===Structure of a putative methyltransferase from Thermoplasma acidophilum.===
+
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ta0852 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2303 Thermoplasma acidophilum])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yb2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yb2 RCSB], [http://www.ebi.ac.uk/pdbsum/1yb2 PDBsum], [http://www.topsan.org/Proteins/MCSG/1yb2 TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[1yb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YB2 OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yb/1yb2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Thermoplasma acidophilum]]
[[Category: Thermoplasma acidophilum]]
[[Category: Cuff, M E.]]
[[Category: Cuff, M E.]]

Revision as of 19:58, 29 September 2014

Structure of a putative methyltransferase from Thermoplasma acidophilum.

1yb2, resolution 2.01Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox