This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1y9b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1y9b" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1y9b.png|left|200px]]
+
==Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961==
-
 
+
<StructureSection load='1y9b' size='340' side='right' caption='[[1y9b]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
{{STRUCTURE_1y9b| PDB=1y9b | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1y9b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor_str._n16961 Vibrio cholerae o1 biovar el tor str. n16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1Y9B FirstGlance]. <br>
-
===Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961===
+
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VCA0319 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 Vibrio cholerae O1 biovar El Tor str. N16961])</td></tr>
-
{{ABSTRACT_PUBMED_015966728}}
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y9b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y9b OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1y9b RCSB], [http://www.ebi.ac.uk/pdbsum/1y9b PDBsum], [http://www.topsan.org/Proteins/MCSG/1y9b TOPSAN]</span></td></tr>
-
 
+
<table>
-
==About this Structure==
+
== Evolutionary Conservation ==
-
[[1y9b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_el_tor_str._n16961 Vibrio cholerae o1 biovar el tor str. n16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y9B OCA].
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
==Reference==
+
<jmolCheckbox>
-
<ref group="xtra">PMID:015966728</ref><references group="xtra"/>
+
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y9/1y9b_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Vibrio cholerae o1 biovar el tor str. n16961]]
[[Category: Vibrio cholerae o1 biovar el tor str. n16961]]
[[Category: Binkowski, T A.]]
[[Category: Binkowski, T A.]]

Revision as of 21:17, 29 September 2014

Structure of Conserved Putative Transcriptional Factor from Vibrio cholerae O1 biovar eltor str. N16961

1y9b, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1y9b"
Views
Personal tools
Navigation
Toolbox