This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yix

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yix" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1yix.png|left|200px]]
+
==Crystal structure of YCFH, TATD homolog from Escherichia coli K12, at 1.9 A resolution==
-
 
+
<StructureSection load='1yix' size='340' side='right' caption='[[1yix]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
{{STRUCTURE_1yix| PDB=1yix | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1yix]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YIX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1YIX FirstGlance]. <br>
-
===Crystal structure of YCFH, TATD homolog from Escherichia coli K12, at 1.9 A resolution===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xwy|1xwy]], [[1j6o|1j6o]]</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ycfH ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
-
==About this Structure==
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1yix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yix OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1yix RCSB], [http://www.ebi.ac.uk/pdbsum/1yix PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/1yix TOPSAN]</span></td></tr>
-
[[1yix]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YIX OCA].
+
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yi/1yix_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Almo, S C.]]
[[Category: Almo, S C.]]

Revision as of 21:57, 29 September 2014

Crystal structure of YCFH, TATD homolog from Escherichia coli K12, at 1.9 A resolution

1yix, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox