This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2deh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2deh" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2deh.png|left|200px]]
+
==Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions==
-
 
+
<StructureSection load='2deh' size='340' side='right' caption='[[2deh]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
-
{{STRUCTURE_2deh| PDB=2deh | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2deh]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DEH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DEH FirstGlance]. <br>
-
===Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cz8|2cz8]], [[2deg|2deg]]</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2deh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2deh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2deh RCSB], [http://www.ebi.ac.uk/pdbsum/2deh PDBsum], [http://www.topsan.org/Proteins/RSGI/2deh TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[2deh]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DEH OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/2deh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Inagaki, E.]]
[[Category: Inagaki, E.]]

Revision as of 01:21, 30 September 2014

Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions

2deh, resolution 2.45Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox