This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ek2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2ek2" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2ek2.png|left|200px]]
+
==Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)==
-
 
+
<StructureSection load='2ek2' size='340' side='right' caption='[[2ek2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
{{STRUCTURE_2ek2| PDB=2ek2 | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ek2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EK2 FirstGlance]. <br>
-
===Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Diphthine_synthase Diphthine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.98 2.1.1.98] </span></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ek2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ek2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ek2 RCSB], [http://www.ebi.ac.uk/pdbsum/2ek2 PDBsum], [http://www.topsan.org/Proteins/RSGI/2ek2 TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[2ek2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EK2 OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ek2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Diphthine synthase|Diphthine synthase]]
*[[Diphthine synthase|Diphthine synthase]]
 +
__TOC__
 +
</StructureSection>
[[Category: Diphthine synthase]]
[[Category: Diphthine synthase]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]

Revision as of 02:31, 30 September 2014

Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (E140M)

2ek2, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2ek2"
Views
Personal tools
Navigation
Toolbox